Poeciliopsis prolifica (blackstripe livebearer): 129371838
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Entry
129371838 CDS
T09758
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129371838 (nphp4)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
129371838 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2155
ASH
Motif
Other DBs
NCBI-GeneID:
129371838
NCBI-ProteinID:
XP_054904638
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MADSWEELFHKNRLIPPSSQTVRLAVENHLTANHGFQLSFSRLTVAHLPQDLSAGEGVAY
QLQVTLFDRKLQHFFGKTWKSSSQKMKSNKISFNEVLYLHTSLLLPSTLVVVELVSLSTK
PDGSCLSLGRGFCILELSTNRPEGLGTNGDRRLNLHRGSPRGLLHPSLKDSVDYGSLLKV
IDGAHLDCVMKTHPSLNSAVHLLPEHALVSGEDNIPGLIPSPTGDALLRPQLLKMTPFTL
DKLTISLQPSLEKFESLLLQLINADCQNTKQPEPEEAQRTVVIQERRLHVGVHNGWCFLD
KPQVVVLEPIASGVRGQTDSTSKKSTLLKDSFATSSRPQMLGLRSSLEIKMANNQALAIV
FQLEYVFSAPIGRETMLSATSTSRAAFLQCLRWGFWCPFQELAHWKGKEVQLVLQGGAKP
NPLGVMVYSTEASVQTHSPAAVSAQEHSEAKDVIRFWLFPSLEKKPSTPRVSLRTKQEDV
PRQRSTPSPSRKQVTPISPPESPRGPGLSLSQLAATSRHPTISHSSSALPWQQSFPSLLN
PSPLASAHQLSHVACLAVSNITHLEMDLQREGGKITSTDEEGDHLQELPFTPIHAPVITL
GVNVPSSCSVSSRSSLAHLFSAGFPEILDCSGQVAEVLDPTEPMPFDPQREEADLLQGNL
LVFEFLAFTRIPGAGVEGDWPRNVYVTFQFYRFPPVTSQQLKLLTSDKVRPKANEALPCV
LATINKDGSVNAGSPGLQIQFRVDDDFLRPREKRWFLRHLALHTMHIDVWDSESLLLIGS
TAIELKYLLRQGKPAVQALHELEILTTEYVEEDTLLPDADQHLRSTSTAMTVYTIVRGRL
HIRTGCIGCPADPSRKRAADGISSYSHIIRPREVTTGFKGGSLSTRNILQLNARNTVHEH
RLDGDPVLLNRNRIGARDIIPDVQNLNTDSRRRKLDCMAAVHRLEAKENPKAADVMGLNP
ATRLIRDHQPSDEYSKAEGIANMLSQAITTQHLLYASLGSAEYMEFVLKNPFNVPQTVTI
HSDDSELSVITDTEEWRYFKAITKTSTPVEENMFHVEEAAPGPRVYLRPKESVHIPLKYQ
SFLCNHTISVQGPSFLPTGKGSQMAKKTLSNIINAKIIKVTFRAEDGKPVAICQVNVEPT
PHVVDQTFRLYHPELCFLKKAIRLPPWEGSTAEDPNSCSHISVHCSDPNIICQTRMLVPG
QPQDVYLKVPGSPSPHIKMFFVMVFTDKWKAAPSQIWQMYVHFLERVDVRCVTGQRTCQS
LVLRGKQAVRKIKCFLSHPKEIEVDPPGVFVLPPAAVQELQLRVQPWQAGSRFLYVNAVD
VDQQRLVAAWLLCLSVHRPVLSKAFEVSVPAGNGRGSSRKITYTNPYTSTRTFLLRSDHP
DLLQFREDKFQIGGGESYTIGLRFAPTQSSGSAEILVYVNNSEEKTEETFCVKVNYS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagctgggaagaattgtttcacaagaaccggttgattcccccgtccagccaa
acagtccgcctggctgtggagaaccacctcaccgctaaccatggctttcagctcagcttc
agccggcttaccgtagcgcatctcccgcaggatctgtcagctggggaaggtgtggcctac
cagctgcaagtgaccctttttgatagaaaactccagcacttttttggaaaaacatggaag
agctcatcccaaaagatgaaaagcaacaagatttccttcaacgaggttttgtacctgcat
acgtccttgctgttgcccagcactctggtcgttgtggagctggtgtcgctgtcaaccaaa
ccagacggctcctgtctctctctggggagaggcttctgcattctggagctttctaccaac
agaccagagggtctaggtactaatggagacagaaggctgaatctacaccgcggatcacca
cgaggcctcctccacccctcgctgaaggactcagttgactatggcagcctactgaaggta
attgatggtgcacatttggactgtgtgatgaaaacacatccttcactgaattctgcagtg
catctgcttcctgagcatgctcttgtgtctggagaggacaacatacctgggctcattcct
tctccaacaggagatgctttgctgaggcctcagctgctgaagatgacgcccttcaccctg
gataaactgaccatttccctccagccttccctggagaagtttgagagccttctgttgcag
ctcatcaatgctgactgccaaaacacaaaacaacctgaaccagaggaagcacaaagaaca
gttgtcattcaagaacggaggcttcatgtcggtgtgcacaatggctggtgtttccttgat
aagccccaagtggtggtcctggagcccattgcgtcaggagtcagaggacaaacagacagc
acctctaagaagagcacgctgctcaaggacagctttgcaacatcatcacgtcctcagatg
ctgggccttcgcagcagcttggagatcaaaatggccaacaatcaggctttggcaatcgtc
tttcagctagagtacgtcttctccgctcctattggccgagagactatgctgtctgctacc
tccacatcccgagctgccttcttgcagtgccttcgttgggggttttggtgtcccttccag
gaactagctcactggaaaggcaaagaggtgcagcttgttctgcaaggaggtgcaaagccg
aatcctctcggagtgatggtctacagcacagaggcgtctgtccagactcacagccctgct
gcagtctcagcacaggaacactcggaggcaaaggatgtgataagattttggctgtttccc
agcttggaaaagaagccatccacccctagggtatctctgaggactaagcaggaggatgtg
ccacgtcagagatcaacaccttcaccaagtcgaaaacaggtcactcccatctctcctcct
gaatcccctcgaggccccgggctctctctgtctcagctggcagctacttcacgccacccg
accatcagccactccagctcggcgttaccgtggcaacagtcatttccttctctgctcaat
ccttccccattggcatcagcccaccagctgtcacatgtcgcctgcttggctgtcagcaac
atcacccacctagagatggaccttcagcgggaaggcggcaaaataacctccacggacgaa
gaaggggatcatcttcaagagctgcccttcacccctatccatgctcctgtcattactctg
ggagtgaatgtgccgagctcctgctcagtcagctccaggagctctctggcacaccttttc
tctgccggctttcctgaaatccttgactgcagcgggcaggtggcagaagtcctggaccca
actgaacctatgcccttcgatcctcagcgggaggaggctgaccttttacagggaaacctg
ctggtgtttgagtttctggcatttaccagaataccaggagcaggagttgaaggcgactgg
cctcgcaatgtctatgttaccttccagttttatcgctttccacctgtcacctcacagcaa
cttaagctgttgaccagcgataaggttcgacccaaagctaatgaggcacttccttgtgtc
ttagccactatcaacaaagacggatctgttaatgctggttctccaggcctgcagattcag
ttcagagttgatgacgatttcttgaggccaagagaaaagcgctggttcctccgccacctg
gccctccataccatgcacatcgatgtttgggacagtgagtcattgctcctcattggttct
accgcaatagagctcaagtatttgctgcgtcagggaaagcccgccgtccaggctctgcac
gagttggagatcctgaccacagagtatgtggaagaggacactttactgcctgacgcagat
cagcatctgcgttcaacatccaccgcgatgacagtttacaccattgtcagaggacggctc
cacatacgaacgggctgcataggatgtccagctgaccctagcaggaagagagcagcggac
gggatatcatcttactctcacatcatcaggcctcgtgaagtcaccaccggctttaaagga
ggaagcctgtcaacccgaaacatccttcaacttaacgcaaggaacacggtgcacgaacac
aggctggatggagatccggtgctgttgaacagaaacagaatcggtgctcgggacatcatc
cctgacgtacaaaacctgaacaccgacagcaggcggcgaaagctggactgcatggctgca
gtgcatcgactagaggctaaagagaacccaaaagcagctgatgttatgggtttaaatcca
gcaactcggttgatcagagaccatcaacccagcgacgagtacagcaaggcagagggaatt
gcgaacatgctgagccaggccatcaccacacagcaccttctctatgccagcctgggctct
gctgaatacatggagtttgtcctgaagaatccctttaacgtgcctcagaccgtcaccatt
cacagcgacgactctgagctcagtgtcatcactgacactgaggagtggcggtacttcaaa
gcaataacgaaaacctcgaccccggtggaggagaacatgtttcacgtggaagaagcagct
cctggtcccagggtttatctccggccgaaagaaagtgtccacattcccctgaagtaccag
agcttcctgtgcaaccacaccatatctgtccagggaccaagctttctgcctacaggcaaa
ggttcccagatggccaagaagacgctgtccaacattattaatgccaaaattatcaaggtt
acattcagagcagaagacggcaagccagtggccatctgccaggtgaatgtggagccaacg
ccccacgttgtggaccagactttccgactttaccaccctgaactttgtttccttaaaaag
gccatccgcctgccgccgtgggaaggctcaacagccgaagacccaaattcctgctctcat
atttcggtgcactgcagtgaccccaatatcatctgccagacgaggatgctggttcctgga
cagcctcaggatgtgtacttaaaagtaccagggagtcccagtccacacataaagatgttc
tttgtcatggttttcactgataagtggaaggcagcgccctctcagatctggcagatgtac
gtgcattttctggagcgggtggacgtcagatgcgtgaccggccagagaacctgtcaatca
ctggttctgaggggaaaacaggctgttcgcaagatcaaatgtttcttgtcacaccccaaa
gaaattgaggtggacccgcccggtgtgtttgttttgcctccggccgccgtgcaggagctc
cagctaagagttcagccatggcaggctggcagccgcttcctgtatgtgaacgctgtggac
gtggatcagcaaaggctggtcgccgcctggctcctgtgtctcagtgtccaccgtcctgta
ctgtcaaaggcattcgaagtgtccgtcccagctggtaatgggcgtggcagctccagaaaa
atcacttacaccaacccttacaccagcacacggacattcctgctccgctccgaccatcct
gacctgctccagttcagagaggacaagttccagattggcggtggagagagttacacgatc
ggattgcgattcgctcccacccagagttcgggctcggcggagatcctggtttacgtcaat
aactcggaggagaaaaccgaggaaacattctgcgtcaaagtcaactattcttga
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