Poeciliopsis prolifica (blackstripe livebearer): 129371903
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Entry
129371903 CDS
T09758
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129371903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129371903
Membrane trafficking [BR:
pprl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129371903
Protein recycling
Other Rab GTPase associated proteins
129371903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
PDS5
Snapin_Pallidin
Herpes_UL25
CSN8_PSD8_EIF3K
Motif
Other DBs
NCBI-GeneID:
129371903
NCBI-ProteinID:
XP_054904733
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MWTDKQRGIRVSQEELLCKNACGYYGNPAWKGFCSKCWRERSRPPGSQTQDTRPSSDGAP
PTFSKFEEKKNIEKGRRISTVRRLFWGSASPSKPQETSESHTKMLKAYESLEPGDFTGFL
KILRSPSSQRLQSRCTAFLNTMEAYHNLQIQKQSDLVQDFYQSFAEYFRSFPESQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDEDTPVTGDP
FLPAITAIIEMDAKRAPQDKLACVSKCSQHIFEALSTSNNEPANADDFLTSLVYVVLKAN
PPRLHSNMQYMIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGPALNLSPEQFDGYMRG
QRAPATLRRQQKANNTQKLLEELQGRQEKLHQGVNALNMQLQKWGEVVNSQLDEITRQFD
KVQKVITAQMEASEVGTSSAEDGSQQKEEEQQPECEALKETV
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagacaaacaaagagggatcagagtttcccaggaggagctgctttgtaagaac
gcctgtgggtattatggaaacccagcgtggaaaggcttctgctccaagtgctggagagag
cgatcacgcccacctggatcacagacacaagacacgagacccagcagcgatggagcgcca
cccacattctccaaattcgaggagaaaaagaatattgagaagggtcgacgaataagcaca
gtgaggcggctgttctggggcagcgcttcaccttcaaaaccccaagagacctctgaaagt
cacactaagatgttaaaagcctatgagagccttgagcctggagacttcaccggttttcta
aagatcctgcggagtccatcttctcagcgtctgcagtcccgctgcacagctttcctcaac
acaatggaggcttatcataatctgcaaatacagaagcagtcggaccttgtccaggatttc
tatcagtcttttgcggaatattttagaagcttcccagagagtcaggtcactcagataatg
gagcatgtggagaagcttataatgactcgattgcacaaatgggttttctgccatgacagc
tgcgatgatgaacagaaggacctggctcttcaacgccgaatacgctccctaaattgggtc
acgccacagatgctgagtgtaccttttccggatgaagacaccccagtcacaggcgacccc
ttcctgcctgccatcacagccataatagaaatggatgccaagcgagcgccacaggacaag
ctggcctgtgtgtcaaagtgcagtcaacacatttttgaagcgctgtccacctccaacaat
gagcctgcaaacgcggatgacttcctgacgagcctggtgtatgtggtgctgaaagccaac
ccgcctcgcctccactccaacatgcagtatatgattcgttttggcctccctcacagcctc
atggctggagagagcggctactatttcacaaacttgtcctgtgcagtggctttcattgag
aagctggatggaccagcactcaacctcagtcctgagcagtttgatggctacatgcgaggt
cagcgcgctcctgctacactaaggaggcagcagaaggccaacaacacccagaaactgctg
gaagagctgcaaggaaggcaggagaagctgcaccaaggtgtgaatgctctgaacatgcag
ctgcagaagtggggcgaagtagttaattcccagctggatgagataaccaggcagttcgat
aaggtacagaaggtgataacagctcagatggaggcctctgaggtcgggacctcttcagct
gaggatggatcccaacagaaggaggaggaacagcagccagagtgtgaagctctaaaagaa
acggtctga
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