Poeciliopsis prolifica (blackstripe livebearer): 129372027
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Entry
129372027 CDS
T09758
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129372027 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129372027 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129372027 (pdlim5a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
129372027
NCBI-ProteinID:
XP_054904968
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MSGNYSVTLLGPAPWGFRLQGGKDFNMPLTISRLSDGGKAAKGGIAVGDTVLSIDGVSTE
GMNHLEAQNKIKNCTGNLSLTLQKSSVSKPPPVAPKDNRTDLIKPVAITHPSVSHHPQSQ
CSAPYNKAPRPYGGCSSEGVCSPSQPPFTTFIPSPSSAFTPASSHIGPPPPPLPPLVSYP
SSASFSSSPPVLVAPQPSVYNTPINLYSTENACEVAMGQRRGLLESQGGALPHFNGIPRK
HIVDTDIHFYHVPSHADASRKRIMEDTEDWRPRTGTTQSRSFRILAQITGTENVQNEEAD
ASQKTNEEDEETQLNSHESAVVKTMMKGSASNHGRGVQSGLITPSFGMKGNGSASVLRGP
VPARPVPQPHPKDEDTLVQMAEHIPAGMRTPMCAHCNMVIRGPFLVAMGKSWHKEEFNCA
HCRTSLADIGFVEEKGSVYCEHCYEEFFAPTCSRCQAKILGEVINALKQTWHVYCFMCAA
CQQPIRNNTFHLEDGEPYCEQDFYSLFGTGCHGCEFPIEAGDKFLEALGYNWHDTCFVCV
VCCASLEGQTFFSKKDKPLCKKHAHTVKI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaactacagcgtcactctgttggggccggccccttggggtttcaggctacaa
ggagggaaggactttaacatgcccctcaccatctccaggctgtcggatggtgggaaagca
gccaaaggtggtattgcagtcggagacacagttctctccatcgacggtgtttccacagag
ggcatgaaccaccttgaggcccaaaacaaaatcaagaactgcaccgggaaccttagtctc
actctgcagaaatccagtgtttctaagccccctccagtggcaccaaaggacaaccgaaca
gatctcataaaaccagtagccatcacccatccctctgtttcacatcatccccagtctcag
tgctctgccccttacaacaaggccccccgaccttatgggggttgcagctctgagggtgta
tgctctccttcacagccacctttcaccaccttcatcccttccccatcctctgccttcact
cctgcttcatcccacattggtcctcctcctccccctcttcctcctttggtctcttaccca
tcctctgcatccttttcctcctccccccctgtcctggttgcgcctcagccatcagtgtat
aatacaccgatcaatctctactcaactgaaaatgcgtgtgaggtggccatggggcaaagg
cggggcctgttggagagtcagggaggagccttaccacattttaatggtattcccaggaaa
catattgtggacacagacatccatttttaccatgtgccttctcacgctgatgccagtaga
aagcgcataatggaggatacagaggattggcgtccacgcacaggcaccacccagtcccga
tctttcaggattctggctcagatcacaggcacagagaacgttcaaaacgaagaagctgat
gcatcacagaagacaaatgaggaggatgaggagacacagcttaactcacatgaatctgct
gttgtcaaaactatgatgaaaggatctgcttcaaaccatggtcgaggagtacagagtggt
ttgatcactccatcttttggaatgaagggtaatgggagtgccagtgtcctcaggggtcct
gttccagcccgaccagtgcctcaaccccaccccaaagatgaggacactctggtccagatg
gcagaacacattcctgctgggatgcgaaccccaatgtgtgcccactgcaacatggtgatc
agaggaccatttttggttgcaatgggaaaatcatggcacaaggaggaatttaactgtgcc
cactgccgaacatctctggcagacataggctttgtggaagaaaaaggctctgtgtattgt
gaacactgctatgaagagttctttgcaccaacctgcagccggtgccaggccaagatatta
ggggaggtaattaatgccctgaaacaaacatggcatgtctattgcttcatgtgtgctgcc
tgtcagcagccaatcaggaacaacacctttcacctggaggatggagaaccttattgtgag
caagacttttacagtttgtttggaactggctgccatggctgtgagttccctattgaggct
ggagacaaatttctggaggcactcggttacaactggcatgacacctgctttgtttgtgtt
gtatgttgtgcctctctggagggtcagacctttttctccaaaaaggacaaacctctttgc
aagaaacatgctcacacagtgaagatatga
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