Poeciliopsis prolifica (blackstripe livebearer): 129372051
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Entry
129372051 CDS
T09758
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137
Mitophagy - animal
pprl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129372051 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129372051 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129372051 (vcp)
03009 Ribosome biogenesis [BR:
pprl03009
]
129372051 (vcp)
04131 Membrane trafficking [BR:
pprl04131
]
129372051 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129372051 (vcp)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129372051 (vcp)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129372051 (vcp)
Membrane trafficking [BR:
pprl04131
]
SNARE
SNARE associated proteins
Others
129372051 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129372051 (vcp)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129372051 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
NPHP3_N
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
129372051
NCBI-ProteinID:
XP_054905018
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLQTAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWDDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSAAGG
SGPSHGSGGTGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggaggggaatccaaaaatgatgacctacaaactgccattctgaagcaaaag
agcagacccaacagactgattgttgatgaatctatcaatgaagacaacagcgtggtctct
ctttctcaggccaagatggacgaactgcagctcttccgtggtgacacagttctgatgaag
gggaagaagaggcgggagactgtgtgcatcgtgctctcagatgacacctgctctgacgag
aaggtccggatgaacagggtggtccgcaacaacctgagggtccgtcttggtgacgtcatc
agcattcagccttgtcctgatgtgaagtacggaaagaggattcatgtcctccctatagac
gacacagtggagggcattactggcaacctgtttgaagtctacctgaagccatactttctg
gaggcttacagaccgatccgcaaaggtgatattttcctggtcagaggcgggatgagagcc
gtggagttcaaggtagtggagactgatccatccccctactgcatagttgctcctgacaca
gtcattcactgtgagggtgagccaatcaggagagaggatgaggaggagtctctgaatgaa
gtgggctatgatgacattggaggagttaggaagcagttagctcagatcaaagagatggtg
gagctgcctctcagacatcctgcactgttcaaggccattggagtcaagcccccacgtggc
attcttctatatggaccacctggaactggaaaaaccttgattgccagggctgtggccaac
gaaacaggagctttctttttcctaattaacggccctgagatcatgagtaagctggctgga
gagagtgagagtaacctgagaaaggcttttgaggaagcggagaagaatgctcctgccatc
atctttattgatgaacttgatgcaattgctccaaagagagagaagactcatggagaggtg
gagaggcgcatagtttcccagctgctgactcttatggatggcctgaaacagagagctcat
gtgattgtcatggcagccaccaacagaccaaacagcattgatccagctctcaggagattt
ggacgctttgacagagaagtggacattggcatccctgatgcgaccggcaggttggagatt
ctgcagattcacaccaagaacatgaaactagctgacgatgttgacttggaacaggtggcc
aacgagacccacggccacgtcggtgcggatctggcggctctctgctccgaggccgccctg
caggccattaggaagaagatggacctgatcgacctggaggacgagactattgatgccgaa
gtcatgaattctcttgccgttaccatggacgacttcaagtgggctctgagccagagcaac
ccatcagctctgagggagacggttgttgaggttcccaatatcacctgggacgatattgga
ggtctggaagatgtcaagagggagctgcaggagctggtgcagtaccctgtggagcatcca
gacaagttcctaaagtttggcatgaccccatccaagggtgtgcttttctacggtcctcct
ggttgtggtaagactctgctggccaaagccattgccaatgagtgccaggcaaacttcatc
tccatcaaaggacccgaactgctcactatgtggtttggagaatctgaggctaatgtcaga
gagatctttgacaaggctcgtcaggctgctccgtgtgtcctcttcttcgacgagttggac
tccatagctaaggctcgcggcggcaacgttggcgatggcggcggagccgccgaccgtgtg
atcaaccagatcctgaccgagatggacggcatgtcgagcaagaagaacgtcttcatcatc
ggcgccaccaacaggccagacatcatcgacccggccatcctgagacctggccgtctggat
cagctcatctacatccctctgccagatgagaagagcaggatcagcatcctgaaggccaac
ctgcgcaagagtcccatcagcaaggatgtggacttggacttcttggctaagatgaccaat
ggcttctcaggcgctgatctcacagagatctgccagcgggcctgtaagctggccatccga
gagagcatcgagaacgagatccgcagagagcgggagaggcagacgaacccatcagccatg
gaggtagaagaggatgaccccgtgccagagatcaggaaggaccactttgaagaagccatg
cggtttgcccgtcgctctgtcagcgacaacgacatccgcaaatacgagatgtttgctcag
acactgcagcagagccgaggctttggcagcttcaggtttccctccagcgctgcaggtggc
agcggtccaagtcacggctctggtggaactggtactggcccagtgttcaacgaagataat
gacgacgacctttatggataa
DBGET
integrated database retrieval system
