Poeciliopsis prolifica (blackstripe livebearer): 129372164
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Entry
129372164 CDS
T09758
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129372164 (pole)
03410 Base excision repair
129372164 (pole)
03420 Nucleotide excision repair
129372164 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129372164 (pole)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129372164 (pole)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129372164 (pole)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
129372164 (pole)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
129372164 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Sigma70_ner
APP_N
Motif
Other DBs
NCBI-GeneID:
129372164
NCBI-ProteinID:
XP_054905229
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MVLQNSGRYKSDRGQSGANQENQDDGSSMSALKRLERSQFTDDMDARFGFDRMKEPGEKT
GWLVNMHPTEILDEDKRLVSAVDYYFIQEDGSRFKVALPFKPYFYIATKKNCEREVISYL
SKKFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNRER
EQANDAYTSMLSSALSGGSVISADEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIH
VAHWYNVRYRGSTFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSEDIEDFEFTPKPEYDGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQIFNKMTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAVEEEEKIPLEQVTNFNEV
CDEIKKKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGPPRAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERITTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
STAQDNGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNDKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVDPTALTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYSSVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSKRLEEYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLLDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQIAHQP
VEAGQAADMEDFGAAPRPLHPAILISTKRKRASQGEDSQVESQDMELTQSWREILGPPPP
MGKTREERLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEPQPVGGGVIRGGPSTGLGSFL
RRTARSILDMPWQIVQIAETNHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQDEGG
IAYRKVNRMLPRSNIVYYLYEYSVPEDMYQNHINEINADLSAPDIEGVYETQVPLLFRAL
VQLGCVCMVNKHIVRDLAGRETDSFDLEHLDMRSLAQFSYLEPGSVRHIYLYHHSQGQKA
LFGLFIPSQRKASVFILDTVRSNQMPNLSNVYTAERTALLEKTSEELLPPEKHTFEVRAE
NDIKAVSRALQRILLNYKDERRGPTLIAVQSNWELQRLTAGMPVLEEFPVVPVHVVDEIN
YNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLR
KHNHLLWLSPTSRPDLGGKEADDSRLVMENDEKGSVEINSQGCYSTACVELDLQSLAVNT
ILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSM
VVGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKR
LGSTVVYGNFNRIILCTKKRRIDDAIAYVEYITKSIHSREIFHSLSITFSRCWEFLLWMD
PSNYGGVKGKLPSSVLYGEEGTKQKKRKQGEEDKEGSEDEDEDDAEEDDGDTETDEVEDL
IESNWNVMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVRRRAGSQASQ
QAVGDLSALPGMISFSQEYVASELTQNIFTITQKIQKKVTGTRNVTQTSEMFPVLPGSHL
PLNNPALEFVKYVCQVLLLDANIVNQVNKLKRDLLRLVDVGEFSEEAQFRDPCNSYILPE
VICHHCNFCRDFDLCKDPTVAQDGSVLPQWFCSNCQMQYETESIETALVEALQKKLMSYT
LQDLVCTKCKGVKEANMPLYCACAGNFDLTFSAKSFCEQTAVFRNIASHYNMRYLEETID
WLLEMSPQISQSRH
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcagaacagcgggcgatacaaatcggacaggggccaaagtggagcaaaccaa
gaaaaccaggatgacggatcctccatgtcggcgctcaagcggctggagcgcagccagttc
accgacgacatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacg
ggctggctggtcaacatgcaccctaccgagatcctggacgaagacaaaaggttggtcagt
gccgtggactattattttatccaggaggacgggagcagattcaaggtggctcttcccttc
aagccttacttctacatagctactaaaaagaactgtgagagagaggtcatctcatatttg
tccaagaagttccaaggaaaagtggcgaagcttgaaattctcccaaaggaggacttggac
cttccgaaccatcttgttggactgaagagaagctacatcaagctgtcattcaacacagtg
gacgatctagtcaaagtcaagcgtgagatttctccagccgtacgcaagaacagagagagg
gagcaggccaacgacgcctacacatcaatgttgtcaagtgctctgtcaggaggcagcgtg
atctcagcagatgaggacgggactttgaagagtatcgccgatcagctggacaatatcgtg
gacatgagagagtatgatgtcccttatcatgtccgagtgtccatcgacctcaagattcat
gtggctcactggtacaacgtccgataccgaggcagcaccttcccaccagagattgtgcga
cgagacgatctggtcgagcgcccggaccccgttgttttggctttcgacatcgaaaccacc
aaacttcctctgaaattcccagacgcagagacggatcagattatgatgatctcctacatg
atcgacggacagggctttctaatcacaaatagagagattgtctccgaggacattgaggat
tttgagttcacccccaagccagaatatgacggacctttcacagtttttaacgaggatgac
gaggctgctctcatccagaggtggtttgatcacgttcaagaaacaaagccgaacatcttt
gtcacctacaatggagacttttttgactggccttttgtcgagactcgggcggcgctccat
ggactgagcatgcacagggaaattggtttccagaaggacaaccagggagagtataaatcc
agtcaggccatccacatggactgcctcaggtgggtaaaaagggacagctacttgcctgtg
ggaagtcacaacctgaaggctgcagccaaggctaaactgggctacgacccggtggagctg
gacccggaggagatgtgccgaatggcaactgaggaaccacaaaccttagcaacctactct
gtgtcagacgctgtggccacatattacctctacatgaaatatgttcaccccttcatcttc
gccctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttcaggcacc
ctgtgcgaagccttgctcatggtgcaggccttccatgccaacatcgtcttccctaacaag
caggagcagatctttaacaagatgacggacgacggccacgtcctggactcagagacttac
gtgggaggccacgtggaggcgctggagtctggagttttccgcagcgacatcccctgtcgc
ttcaagatgaacccggctgccttcgactttctgcttcaaagagtcgagaggacgatgcgt
cacgctgtcgaagaggaagaaaagattcctctggaacaagttaccaactttaatgaggtt
tgtgatgaaatcaaaaagaagctaacctccttgaaggatgtcccaaacaggatcgaatgc
cccctcatctaccatctggacgtcggggccatgtaccccaatattattctcacaaatcgt
ctgcagccatcagctatggttgatgaggccacatgtgctgcctgtgactttaacaaaccc
ggggccacctgccagaggaggatggcctggcagtggagaggagaaatcatgcctgcaagt
cgcagtgagtttcatcgcatccagcagcagctggagtctgagaagtttccacctctcttc
cccaacggccctcctcgggcgttccacactctgaaccgggaggagcaggccaaacacgag
aagaaacggctggcagattattgcaagaaggcctacaagaagactcacgtcacgcggctt
gaggagcgaattaccaccatctgtcagagagaaaactccttctacgtcgacacagtcaga
gctttcagggatcggcgttatgaattcaaaggacttcacaaagtgtggaagaagaagctg
tcaacagctcaggacaatggagatgctgctgaggtgaagcgctgcaaaaacatggagatc
ctgtacgagtctcttcagctggcccataaatgtattcttaactctttctacggctatgtc
atgagaaaaggggcgcgctggtactccatggagatggctggcatcgtgtgcttcactgga
gctaacatcataactcaggccagagaacttatcgaacaaatagggaggcctctggagctg
gacactgacggaatctggtgtgtcctccccaacactttccctgagaactttgtggtaaaa
accagcaatgataaaaaacctaaagtgaccatctcttacccgggggccatgctcaacatc
ctggtgaaggagggattcactaatgatcagtaccatgagctggtcgacccaacggcgctc
acttacaacacccggtcagagaacagcatcttcttcgaggtggacggaccgtatctggca
atgattctgcccgcctccaaagaggaggggaagaagctgaagaagaggtatgccgtgttt
aacgaggacggctcattggctgagctcaaaggctttgaagtgaagaggagaggagagctt
cagctcattaagatttttcagtcatctgtgtttgaggcattcctcaaaggcaccactctg
gaggaggtctactcatcagtggccaaggtggccgactactggctggacgtgctttacagc
aaggccgccaacatgccagatgcagagctgtttgacctgatctcagagaaccgctcgatg
tccaagaggctggaagaatacggcgagcagaagtccacgtccatcagcacggccaagagg
ctggccgaattcctgggagaccagatggtgaaagatgctggtctgagctgtcgctacgtc
atctcccggaaaccagagggttccccagtcacagaaagggccattcctctggccatcttc
caggctgagcccagcgtaaagaaacatttcctccggaagtggctgaagatgcccagcctg
cttgacttggacatccgctctatcctcgattggagctattacatcgagaggttgggtagt
gcaatccaaaaaattatcaccatccctgcagcgctgcagcaagtgaagaatccagttccc
agagttaggcatcctgattggctccacaagaaactcctggagaaaaacgacatctacaag
caaaagaaaatcagtgaactgttcaccagtgagggcaagagacagattgcccatcagccc
gtggaggctggccaagctgcagacatggaggactttggggcagcaccacgacccctgcat
cctgctatccttatcagcaccaagcggaagcgggcttcgcaaggagaggacagccaggtg
gagtcccaagatatggagctcacacagtcctggagggaaatcctgggacctccacctcca
atgggaaaaacacgggaggagcgactggtgtggctgcgctatcacaagaaaaagtgggag
ctgcagctgaggcaaaggaaggagaagaaaaagagaaggaagctgctggatggagaacca
caaccagtcggaggaggagtcattagaggtggccccagcaccgggctgggaagcttcctg
cggcggacagcgcgcagcatcctcgacatgccgtggcagattgtgcagattgcagagacc
aaccaccctggtctgtataagctgtgggctgtgattggaaacgatcttcactgcatgaag
ctcaacatccctcgcgtcttctacgtcaaccagaaagttccaaaacaggacgaaggagga
atcgcgtacaggaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctgtat
gagtactcagtgccagaggacatgtatcagaaccacatcaacgagatcaacgctgacctc
tctgcaccggacattgaaggagtctatgaaacacaggtccccctgttgttccgtgcgctg
gtgcaactgggttgtgtgtgtatggtaaacaagcacattgtgagggatctggctggcagg
gagactgactccttcgatctggagcatctggacatgagatctctggcccagttcagctac
ctggaacctggaagcgttcgccacatctacctgtaccatcacagccaaggccagaaggcc
ctttttggcctcttcatcccctctcagcgcaaagccagcgtcttcatcctggatacagtc
agaagtaaccagatgcccaacctgagtaatgtctacacagctgagcgcaccgccctcctg
gagaagacttcagaggagcttctgcctccagaaaaacacaccttcgaggttcgagctgaa
aatgacatcaaggctgtctcccgagctttgcagcgcatactgctgaactacaaggatgag
cgacggggacccaccctcattgctgtgcagtctaactgggaactgcagcgactgacagca
gggatgcctgttcttgaggagttcccagtggttccagtacacgttgtggatgagatcaac
tacaatgtgctggactggcagcggcacggagcccggcgtatgatccgccattacctcaac
ctggacagctgcctgtcacaggcttttgacatggccagatactaccaccttcctgtgggg
aacctgcctcaggatgtgtcgatcttcggctcagacttgttcctagcgagacatctgcgg
aaacacaaccacctgctgtggctttctcccacatcgagaccagaccttggaggaaaagag
gctgacgacagtcgtttggtcatggaaaacgatgagaagggttctgtagagataaactct
cagggatgttactctacagcatgtgtggagttggacctgcagagcctggcagtgaacaca
atcctccagtcgcaacacgtcaacgacatggagggcggagccagtctgggtgtcagtttt
gatgtgatccagcaggcctcactggaggacatgatgtcaggaaaccagggcgccagcgct
ctcgctagctacgatgagacggcgctctgctccaacaccttcaggatcttaaagagcatg
gtggtcgggtgggtgagggagatcacacagtaccacaacgtgtatgcagacaaccaggtg
atgcatttctaccgctggctgcgctctccgagttctctgctctacgacccggcgctgcat
cgcaccctgcacaacatgatgaagaaagtgtttctgcagctagttgcagagttcaaacgt
ctgggatcaactgtggtgtacgggaacttcaacaggatcatcttgtgcacgaagaaacga
aggatagacgatgctattgcctatgtggaatatatcaccaaaagcatacattcacgagaa
atcttccactctctgtccatcaccttctcacgttgttgggagttcctgttgtggatggac
ccgtctaactatggtggtgtgaagggaaaactgccttccagtgtcttgtacggagaggaa
ggaaccaaacagaagaaaagaaaacaaggagaggaagacaaagagggcagtgaagatgaa
gatgaggatgatgctgaggaagatgatggcgatacggagaccgatgaggttgaagatctg
attgagagcaactggaatgtcatgcattatctcccccaaacagcctcctgtcagaaatac
ttcctcatgattgtgtctgcctacatagctgcagtttaccacagcatgaaagaggagctg
agacgtaatgctcctggagcaacgccagtcaggaggcgcgcaggcagccaggcttcccag
caggcagtcggggacttgagtgcgcttcctggaatgatctccttctcccaggagtacgtg
gccagcgagctgacgcagaacattttcaccatcacccagaagatccagaaaaaggtgact
gggaccaggaatgtcacccagacctcagagatgtttcctgtcctgcccggctcacacctg
ccgctcaacaatccggcgctggagttcgtcaaatacgtttgtcaggttcttttgcttgat
gccaacatcgtgaatcaggtgaacaaactaaagagagatctcctgcgtctcgtggatgtc
ggagagttttcggaggaggcccagtttcgtgacccctgtaactcttatatactgccagaa
gtcatctgtcaccactgcaacttctgtcgggacttcgacctctgcaaggacccgactgtg
gcacaggatgggtcggtcttacctcaatggttctgctcaaattgccaaatgcaatatgaa
actgagtctattgagacggccctggtggaggctctgcagaagaaacttatgagctacact
ctgcaggatctggtctgcaccaaatgcaaaggggtgaaagaagccaacatgcccctttac
tgtgcgtgtgccggaaactttgacctgaccttctcagccaagagcttctgcgagcagacc
gcagtgtttcgaaacatagcttcccactacaacatgagatacctggaggagaccatcgac
tggctgcttgagatgagccctcagatcagccagagcaggcactga
DBGET
integrated database retrieval system
