Poeciliopsis prolifica (blackstripe livebearer): 129372165
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Entry
129372165 CDS
T09758
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03022
Basal transcription factors
pprl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129372165 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
129372165 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129372165 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129372165 (gtf2h3)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129372165 (gtf2h3)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129372165 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
129372165
NCBI-ProteinID:
XP_054905230
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MASEDELNLLVIVVDVNPIWWGQQGQREPEFTLCKCLDAVMVMGNCHMAMTRTNRLAVIA
SHCQDSHFLYPSKTWKSGDSGGDEISSSRDGKYELLAVANNLIAEEIRNIMTKTEVTGNS
TDTLLAGSLAKALCYIHRVSKELEVGQEMKSRILVIKAADDCALQYMNFMNVIFAAQKQN
ILIDACVLDSDSGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQAA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatgaattgaatctcctggtcatcgtggttgatgtgaatcccatctgg
tggggtcagcaaggtcagcgggagccagagttcactttgtgcaagtgtctggatgcggtc
atggtgatgggaaactgccacatggcaatgacgaggacaaacaggcttgccgttatcgcc
agtcactgtcaagacagtcacttcttgtatcccagtaagacttggaaaagtggagacagt
ggtggggatgaaatttcctccagccgggatggaaaatacgaacttctagctgtcgccaac
aacctcattgctgaagagatcaggaatattatgactaaaactgaagtgacagggaattca
actgacaccctgttggcaggatctcttgccaaagccctctgctatattcacagggtctca
aaagagttagaagttggacaggagatgaagtcaaggatattggtgataaaagcagctgat
gactgcgctctccagtacatgaacttcatgaatgttatttttgctgcacaaaagcagaac
attctgatagatgcatgtgtgctggactcagactcagggctgcttcagcaggcttgtgac
ataacaggaggcttgtacctgaagataccgcagaaagtcgccctggctcagtatcttctg
tgggtgttcctgcccgactcggagcagcgctcccagctggtgctgccgccgcctgcccac
gtggactacagagctgcttgtttctgccaccgtaacctcatcgaaatcggttacgtctgc
tccgtttgtctgtcgatattctgcaacttcagccctatttgtacaacatgcgagacggcc
tttaaaatccagctacctcagatggtcaaacctaaaaagaagaaattgaagcaagcagct
tga
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