Poeciliopsis prolifica (blackstripe livebearer): 129372199
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Entry
129372199 CDS
T09758
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129372199 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129372199 (thoc5)
03041 Spliceosome [BR:
pprl03041
]
129372199 (thoc5)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129372199 (thoc5)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129372199 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
129372199
NCBI-ProteinID:
XP_054905284
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSTDALKKRKSKVLRGEGGTPETKRGRGDVDQDVRVYNEEGELDGRDPEQDYLQYKESCE
SLAAVMSEIQELKANGAKEGNAEVELRRMQGCIHFMNLKKLNRLAHMRLKRGRDQTHEAK
QKVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFFQDAPPEISRPSLTK
NDPHQLTLARLDWELEQRKRLAEKYEESQSTKEKIQKTIEVKKEHLGSLQPGLNAIMQAS
LPVQEYLSMPFEKTQKQAEIARHLPPPLYVLFVQANAYGQACDKNLSVSICGDVDEARAL
SKPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLSLDLQCKDGST
LHLYFFYLMNLNILTVKTNVSTSTDLNAAISAGELLKSETLLSCLYTSDQGRETPNPANR
YQFDKVGIVSFADYVEELGYPYMWVQNLGGLHFPTESSEGVLVGSSLSASHMETTMKLLR
GRVLSRLALHKQFASLEHNIIPISAECQHLFPAKIISRLARWTTITQQEYLELPYTHHVT
EAGLARETDLYFMAVVERGTARLHAAVVLSPRYPEVSPLFSLSLNWKGECSGRSDDNLRA
MESEVNVFKNELQGPKPGHQLLTNQIARLCVCLDVYLETEVQDDSVEGPREFPREKMCLR
TVRGPNRLKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgatgccttaaagaagagaaagtcgaaggttctccgcggtgaaggagggacc
ccagagacgaagcgaggccggggggatgtggaccaggacgttcgtgtctataatgaggag
ggggagctggacggcagggaccccgagcaggactacctgcagtacaaagaatcctgtgag
agtctggctgcagtcatgagtgagatccaggagctgaaagccaacggcgccaaagagggg
aatgctgaggtggagctgagacgcatgcagggctgcatccacttcatgaacctgaaaaaa
ctcaaccgtttagctcacatgcgtctaaaaagagggcgagaccaaacccatgaggcaaag
caaaaggtcgatgtgcttcatcttcagctgcagaacctcctctatgaggttatgcatctt
cagaaggagatcagcaagtgtctcgaattcaaatccaagcatgaagaaattgacctggtg
agcgaagaggagttcttccaggatgctccgccggagatttccaggcccagcctgaccaaa
aatgatccccaccagctgacactggcaagactggactgggagctggaacagaggaagagg
ttggcggagaaatacgaggagtcacaatccactaaggagaaaattcagaagaccatagag
gtaaagaaagagcatctgggaagccttcagcctggactgaatgccatcatgcaggcatct
ctcccagtgcaggagtacctgtccatgccattcgaaaagacccagaagcaggcagagatt
gcccgtcaccttcctccaccgctctacgtgctgtttgttcaagcaaatgcttacggccaa
gcctgtgacaagaacctgagtgtgtcgatctgcggtgacgtggacgaggccagggccctt
tccaagcctcctgatgattctcaagatgatgagagtgattcagatgcagaagaggagcag
gagaaaacgaagagaaggaggccgacaacaggtggacaactggacgacaaaagacgagag
atgctaaaaagacaccctctttctctgagcttggaccttcagtgtaaagatggcagcact
ctgcatctctacttcttctacctgatgaatctgaatattttgactgtgaagacaaacgtc
tctacatccacagacctcaacgcggccatcagcgctggagagcttcttaaatctgaaact
ctcctgagctgtctctacaccagtgaccaaggaagagagactcccaatccagccaatcgc
taccagtttgacaaagtcgggattgtttcctttgctgactatgtggaggagctgggatat
ccctacatgtgggtccagaatctgggaggacttcatttccccactgaatcatcagagggc
gttctggtgggcagttctctgagcgccagccacatggagaccaccatgaagctgctgagg
gggcgagtcctgtcccgcttggctctgcacaaacagtttgcttctttagagcacaacatc
attccgatctccgccgagtgtcagcacctgtttcctgccaagatcatctcccgtctggct
cggtggaccaccatcactcagcaggagtacttggagctgccctacactcatcatgtaact
gaagccggactggccagagagacagacctgtacttcatggcagttgtcgaaagaggaaca
gcgcgtcttcacgcagctgtggtcctgagtccccgctacccagaagtctctcctctgttc
tctctgtccctcaactggaagggagagtgcagcgggcgcagtgatgacaacctcagagcc
atggagagcgaagtgaatgtgttcaaaaacgagcttcagggcccaaagcctgggcatcag
cttctgaccaatcagatcgcacgcctgtgcgtctgcttggacgtgtatttggagacagaa
gtgcaagatgacagtgtggagggacctcgggagttcccacgagaaaaaatgtgtctgcgt
actgtcaggggtccaaaccgcctgaagccgttcaagtacaaccaccctcagggcttcttc
agtcaccgttag
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