Poeciliopsis prolifica (blackstripe livebearer): 129372226
Help
Entry
129372226 CDS
T09758
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04020
Calcium signaling pathway
pprl04260
Cardiac muscle contraction
pprl04261
Adrenergic signaling in cardiomyocytes
pprl04270
Vascular smooth muscle contraction
pprl04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129372226
04020 Calcium signaling pathway
129372226
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129372226
09153 Circulatory system
04260 Cardiac muscle contraction
129372226
04261 Adrenergic signaling in cardiomyocytes
129372226
04270 Vascular smooth muscle contraction
129372226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129372226
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129372226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
DUF2670
Motif
Other DBs
NCBI-GeneID:
129372226
NCBI-ProteinID:
XP_054905324
LinkDB
All DBs
Position
Unknown
AA seq
1843 aa
AA seq
DB search
MATNADSAKPVIMNEEELKKKQREKLKRLQATGGNPRPARTLFLFSLRNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDSNNTNENLESLEYIFLIIFTFECFMKIIAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFGLDTINMIAGVEKEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYIGTN
IYATAEGELPAPCAQAGHGRRCTVNGSECRPNWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWLYFVPLILVGSFFVLNLVLGVLSGEFTKEREKARSRGEYQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDADTDSLYDLEGKSRIIYFYR
LGLRWNRFFRMKCLIYVKTKTFYWAVMFLVFLNTLTIATEYHKQPDSLTSLQDVVSRILL
VLFVFEMMVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSVGAVAPLGFSVLRCIRL
LRIFKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFDYNRP
RRSNFDNFPQALISVFQILTGEEWTNIMYNGIMAYGGPEIPGILVSIYFIILFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKMRKKLLRSKMPEKTDEERERIAKKLAEQRAK
MEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTSVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVTVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFSSCTDPTKVTAEECKGYYVKHMENSLQETVLAERKWINNDFNFDNVLNGMLALFTV
STFEGWPKLLYRAIDSAEEDMGPVYNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSNYVTKLSDTLNLIFTVLFTVEMILKLLAFKVRGYFGDPWNVFDFIIV
IGSVVDVILSEVDAALVSSGGLYCLHGCAETDPMEEIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALQDGTQINHNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKQCDPMSDFLPGEEFTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNGDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHFRKFLKRQEEYYG
FRPSKKSTSGPEIQAGLRSIEEEAAPEMHRAISGDLQNEEEMDRAMDEAAEETIYQRSHG
LFGNRVESFSAEATDAQNSQMTHQRPLQFSESQSESPPNSSALAPGADFFPATAPKSNTN
NNAFAEFFFDREASPDEFYNPSEDEEPDLRHSWNFTVQTNKTQFPYEPEWMESRSRSSRT
PADQLVQEALEMGGLASLSKDPGFVSETKKEMADAMHIPISEMEGVARGILSERSDSVPS
AKKRRPVPAGGGQKPGQPEPAVRKKRRPVPTVPSRKKQNDSEV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacgcggattcggccaagccggtcatcatgaacgaggaggaattgaagaag
aagcagagagagaaactgaagcggcttcaggccacaggtggcaaccctcgacctgccagg
accctcttcctcttttccctcaggaaccctttccgaaaggcctgcatcaacattgtggag
tggaaaacctttgaaatcatcatcctgttaaccatctttgccaactgtgtggctctggct
gtattcttacccatgcctgaagaagacagcaacaacaccaacgagaacttggaaagtctg
gagtacatcttccttatcatcttcacattcgagtgcttcatgaagatcatagcatatggg
ctggtgttccatgaaggggcctatttaaggaactgttggaacatattggactttgtcatc
gttttcatgggactcttcacctttggcttggataccataaacatgattgcaggagtggag
aaggaaaagggtgggggctttgacatgaaggcactgagagcgttcagagtactgcggccc
cttcgacttgtttcaggagtccctagccttcaggtggtgatgaactccatcctcaaagcc
atgctgcctctgctgcacattgccctgttggtgttcttactggtcaccatctacgccatt
atgggactggagttgttcaaatgcaaaatgcataagacctgttactacattggcacaaac
atctacgcaacagcggaaggtgagctgcctgctccgtgtgctcaggctggacacggacgc
cgctgcacggtcaatggttcagagtgcaggcctaactgggaaggtcccaacaacggcatc
actcactttgataatattggttttgcaatgctgacggtttaccagtgcatcaccatggag
ggatggaccaaagtcctttattgggtgaacgatgctatcggaaacgaatggccctggctc
tattttgttcctctcatcttggtgggctccttctttgtgcttaatcttgtcctgggtgtt
cttagtggggagtttaccaaagagcgagagaaggccaggtcacgaggagagtatcagaag
ttgagggagcgtcagcagctggatgaagatctccatggctacatggagtggatcactcat
gctgaagtccttgatgctgacagagaaggcaaaggccttctgcctcttaccagtggagac
gctgacacagacagcctgtatgacttggaaggaaagagtcgtatcatctacttttaccgg
ctgggtcttcgctggaatcgtttcttcagaatgaagtgtctgatttatgtgaaaaccaag
accttctattgggctgtgatgttcctcgtatttctcaacacgctgaccatagccacagag
taccacaaacagcctgactccctgacatctctgcaagatgtagtgagccggatcctgctg
gtactgtttgtctttgagatgatggtgaagatgtacgccctgggacccagagcctacttc
atgtcgctgtttaaccgttttgacttcttcgtcgtgctctgcggtattctggagatgatc
atgttgtctgtaggagctgtggctcccctgggtttctccgtgctcaggtgtattcggcta
ctgaggattttcaaagtcacaaagtactggacctctttaagcaacctggtggcctctctc
ctcaactccgttcgctccattgcttctctgctcctccttctcttcctctttattgtcatc
ttctcgctcctgggaatgcaggtgtttggagggaagttcaattttgattacaaccgtccc
aggcgcagtaactttgacaactttcctcaggccttgattagtgtatttcagatcctcaca
ggagaggaatggaccaacatcatgtacaacggtataatggcatatggagggcctgagatt
cctgggattctcgtttccatctatttcattatccttttcgtctgtggaaactatatcctc
ctcaatgtattcttggccattgcggtggacaacctggcagaggctgagagtctgacttcg
gcccagaaggaaaaggcagaagagaagatgagaaagaagctgctaaggtccaaaatgcct
gaaaagactgatgaggagagggagaggatagcaaagaaactggctgagcagagagccaaa
atggagggaatgcccactacagccaaactaaaaattgatgaatttgagtcaaatgtcaat
gaagtgaaggatccatttccacctgctgatttcccaggtgatgacgaagaggaagaacct
gaaatcccaatcagtcctcgaccccgaccaatggccgatctgcagctgaaagaagaagcc
gtccctttgccagaagccagctccttttttatatttggtcctcagaacaagtttcgtaag
ctgtgttacaagatcatcaatgcttcgtccttcaccaacctcatcctcctcttcatcctg
ctctcgtccatctcgctggcagctgaagatcccatcgatccaaaatcctatagaaaccag
atcttagcctacgctgatattgtcttcacaagtgttttcaccattgagattgtgctgaag
atgactgtgtatggtgcgttcatgcacgaaggctctttttgtcgtaactcgttcaacatc
ctggatctgattgtggtcacagtgtcactcctgtctatgggaatggaatccagtgccatc
tctgtggtgaagattctcagggtgttgagggtgctgaggccactcagagccatcaacaga
gcaaaaggattaaagcatgtggtccaatgtgtgtttgtggccatcaagacaatcggcaac
atcgtcctggtcaccatgctgctcaatttcatgtttgcctgcattggagtgcagctcttc
aagggcaaattctccagctgcacagacccgaccaaagtgactgcagaggaatgcaaagga
tattacgtgaagcacatggagaactccctgcaagaaacagtcctggcggaaagaaagtgg
ataaacaatgactttaactttgacaacgtgctcaacgggatgctggctctgttcaccgtc
tcaacgtttgagggctggcccaagcttctttatagagctatagactcagcagaagaagac
atgggtccagtttataacaaccgtgtggacgtgtccatcttcttcattatctacatcatt
ctcatcgcctttttcatgatgaacatctttgtgggctttgtcatcgtcacctttcaggag
cagggagagcaggagtacaagaactgcgagctcgacaagaaccagcgtcagtgtgtgcag
tacgctctgaaggctcgccctcttcggtgctacatcccaaaaaacccgtaccaatacaga
gtgtggtacatcgtcacctcatgctactttgagtacctcatgttcttcctaattatgctg
aacacattgtgtttagggatgcagcactgcaaccagtcgaattatgttaccaagctgtca
gacactctgaacctgatcttcactgtgctcttcaccgtggagatgatacttaagctcttg
gctttcaaagtgaggggctactttggagatccctggaacgtctttgatttcatcatagtc
attggtagcgttgttgacgtcatcctgagtgaagttgatgccgccctggtctccagtgga
ggactgtactgtcttcatggctgtgctgagacagatcccatggaagaaattgcggcttct
gaaaacgcctctgtctccatcacattcttccgactcttccgtgttatgcgtctagtgaag
ctgctgaaccgttcggagggcatccgtaacctgctctggaccttcatcaagtctttccag
gctctccctcatgtagctctcctcattgtgatgctctttttcatttatgctgtgatcggg
atgcagatctttggaaaggtagccttacaggacggcacccaaatcaaccacaacaacaac
ttccagacattccctcaggccgttctgatgttattccgatgtgcgactggtgaggcttgg
caggaagttatgatggcgtcgatgtacgggaagcagtgtgaccccatgtctgacttcctg
ccaggagaagagttcacctgcgggtccaactttgctgtcttttacttcctcagcttctac
tgtctctgtgccttcttgatcctcaatctgtttgttgcggtcatcatggacaactttgac
tatctcacccgtgattggtctcttcttggtccacaccatctggatgagttcaagaaaatc
tgggcagaatatgaccccgaggccacagggagaatcaaacatctggatgtggtgacgctg
ctgcgacggatccagcctcctcttggtttcggcaagttctgtcctcatcgcgctgcgtgc
aagcgtttggttgggatgaacatgcctctcaacggcgatggcaccgtcacgttcaacgcc
actttgttcgctctggtcaggacggcactaaaaatcaagactgaaggaaactttgagcag
gccaatgaggagcttcgagcaattataaagcaaatctggaaacgcaccagcatgaaactg
ctggaccaggtcatcccccctataggagatgacgaggtgactgtggggaaattctacgcg
acatttctgctccaagaccatttccgaaagtttctgaaacgccaggaggagtattacggc
ttccgtccatcaaagaagagcacctcgggtccggagattcaggcgggtttgaggagcata
gaggaagaagcggctccagagatgcacagggcaatttcaggagacttgcagaatgaggaa
gaaatggacagagcgatggacgaggctgcagaggaaaccatttatcagcgttctcatggt
ctgttcggcaaccgagtcgaatccttctccgccgaggccaccgacgctcagaactcccag
atgacccaccagcggcccctccagttctcagagagccagtctgagtctcctcccaactcc
tctgccctggcgcccggcgcagactttttccccgctacagcaccaaaaagcaacacaaac
aacaacgccttcgcagaatttttctttgacagagaagccagtccagatgagttctataat
ccctctgaggacgaagaaccagacctaagacactcctggaacttcacagtacaaacaaac
aaaacacagttcccttatgagcccgagtggatggagagtcggagtcggagctcaaggact
ccagccgatcagcttgtccaggaggcccttgaaatgggcggtctggcctccttgtccaaa
gatcctggttttgtctccgaaactaagaaggagatggccgacgccatgcacatccccatt
tcagagatggagggcgtggcgaggggcatcctcagcgaacgctccgacagcgtcccctct
gccaaaaaacgacgtcctgtacctgctggtggaggacaaaaacctggccagccggagccg
gctgtcaggaagaagagacgtccggtccccacagttccgagcagaaagaaacagaatgac
tccgaagtttag
DBGET
integrated database retrieval system
