Poeciliopsis prolifica (blackstripe livebearer): 129372227
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Entry
129372227 CDS
T09758
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04110
Cell cycle
pprl04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129372227 (smc1a)
04114 Oocyte meiosis
129372227 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129372227 (smc1a)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
129372227 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
129372227 (smc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
DUF8567
Motif
Other DBs
NCBI-GeneID:
129372227
NCBI-ProteinID:
XP_054905325
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGASSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTTLFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNEVEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTAHKIKKLEAAKKSHQNAQKMYKKRKADMDELDKEMRAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFVEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTD
DSSSQRTSSSVLAKEALIEIDYSNLSEDLKDTLSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggctacttgaaactcatagagatagaaaacttcaagtcatacaaaggacgacaaatt
atcggaccgtttcacaagttcacggcaatcatcggacccaatggatcgggtaaatccaac
ctcatggatgccatcagctttgtgttggcagaaaagacgagtaacctgcgtgtgaagact
ttgaaagatctaatccatggagctcctgtggggaagccagctgccaacagagcgtttgtc
agcatggtataccaagaggataacggagaggagcgttccttcacacgggtcattattggg
gcctcatccgagtaccgcataaacaataaagtggttggactacctgaatacagcgaggag
ctggaaaaacttggcattctgatcaaagccagaaactttcttgtctttcagggggctgtg
gagtccattgccatgaagaaccccaaagagcgaacaacgctgtttgaggagatctcacgt
tctggggagttggcacaagagtatgaccgcagaaagaaggagatggtgaaagcagaagaa
gatacacagttcaattatcaccgcaagaaaaacattgctgcagagcgcaaagaagccaag
caggagaaggaagaggctgagcgatatcaacgccttaaagacgaggtcgccagagccagt
gtacagttacagctcttcaagttgtaccacaatgaggtcgagatcgagaaactgaacaaa
gagctcggccagcggaataaagaaatcgataaggaccgtaaaaagatggaccacgtcgaa
gaggagctgaaggacaagaagaaagagctgggcaggctgatgagggagcagcagaccatc
gagaaagaaatcaaagaaaaggactctgagctgaatcaaaagaggccccagtacatcaag
gccaaagagaacacggcacacaaaatcaaaaagcttgaagctgcgaaaaaatctcatcag
aacgcccagaagatgtacaagaagcgcaaagctgacatggatgagctggataaggagatg
agagcggtggagttggccaagcaggagtttgaggaaagaatggaggaggaggctcaaagc
cagggccaggacctcacactggaggaaaaccaggtgaagcagtaccatcgcctgaaggag
gaggccagtaagcgcgctgccactctggcccaggaactggagaagttcaaccgggaccag
aaggctgaccaggaccgccttgatttggaggagaggaagaaagtggagacagaggccaaa
atcaagcagaagattcgtgaaatagaagaaaaccagaagcgtattgagaagctagaggac
tacatcaccaccagcagacagtcactcgatgagcagaagcgcatggaggaggagctgacg
gaggaagtagagatggccaagaggaggattgatgaaataaacatggagcttaatcaggtg
atggagcagctgggagacgccaggatcgacagacaggaaaacagtcgacagcagcgcaag
gcagaaatcatggagagcatcaagagactttaccctggatctgtgtacggccgcctgatt
gacctgtgccagcccactcagaagaaatatcagattgctgttactaaagtgttgggcaag
aacatggacgccatcatcgtcgactcagagaaaaccggccgagactgcattcagtacatc
aaggagcagagaggagagcctgagaccttccttcctcttgactatcttgaggtcaaacca
acagatgaaaaactgagagagctgcgcggggccaagctggtgatcgatgtgatccgctac
gagccgccacacatcaaaaaagccctccagtacgcttgcggcaacgctctggtttgtgag
aatgttgaggatgcacgaaggatcgctttcggagggccttacagacacaagaccgtagcc
ctggatggcacgctgttccagaagtcaggagtcatctccggaggagccagcgatctgaag
gccaaggccagacgctgggacgagaaggcggtggacaaactaaaggagaagaaggaaaaa
cttacagaggagctaaaggagcaaatgaaggcaaagaggaaggaggcagaactgcgtcag
gtgcagtctcaggcacacggcctgcagatgagactaaaatactcccagagtgacctggag
cagaccaaaaccaggcacctctccctcaacatgcaggagaaatccaaacttgagagtgaa
cttgcgaattttggccctcgcatcaatgacatcaagaggattatccaatcccgtgagcga
gagatcactgacctccgagaccgcatgaacctagtggaggacgaggtgtttgttgaattc
tgtaaggagatcggagtgagaaacatccgagaatttgaggaggagaaagtgaagaggcag
aatgagatcgcaaagaagcgtcttgagtttgagacccagaagacccgtctgggaatccag
gtggactatgagaagaaccagctgaaagaggaccaggagaaagtcatgatgtgggagcaa
actgttaagaaagacgaggctgagatagagcgccttaagaaggaggagcacagacacatg
aaaatcattgatgagacgatggcccagctgcaggacctgaagaaccaacatctcaccaag
aaatctgaagtcaacgataaaaaccacgaaatggaggagattcgcaaaaaactgggaggc
gctaacaaagagctgacccagctccagaaggaggtcactgccatcgagaccaaactggag
caaaagcgcagtgaccgccacaacctgctgcaggcctgcaagatgcaggacatcaggctg
cctcttcgctccggaaccatggatgatatcagccagggagaagggagctctcagacagat
gactctagcagtcaaaggacgtccagcagcgttctggctaaagaagctctaatagaaatt
gactacagcaacttgtctgaagatctgaaggatacattgtcagaagaggagataaaagca
gagacaaacacactgcagcagcgtctgaacgagcagcagagcatcctgcagaggatcagc
gctcccaacatgaaggccatggaaaaactggagagcgtcagggacaagttccaggagacc
agtgacgagttcgaggcggcgcgtaagagagctaaaaaggcaaagcaagccttcgagcag
atcaagaaagagaggtttgatcgttttaatacctgctttgagtctgtggccaccaacatc
gatgagatctacaaagctttgtcacgcaacagcagcgcccaggcttttctgggcccagaa
aacccagaggaaccgtatctggatggtatcaattataactgtgtggcgccagggaaaagg
ttcagacccatggataacctgtctggaggagagaagacggttgctgccctggctctgctt
tttgctatccacagctacaaaccggcaccgttcttcgtcctggatgagattgatgccgct
ctggacaacactaatattggcaaagtggccaattacattaaagaccagtcagtacaaaac
ttccaagctattgtcatttctctgaaggaggaattctacaccaaggctgactctcttata
ggcgtttatccagagcaaggagattgtgttatcagcaaagttctcacctttgacctgtcg
cagtatcctgatgccaacccgaatccaaatgagtaa
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integrated database retrieval system
