Poeciliopsis prolifica (blackstripe livebearer): 129372290
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Entry
129372290 CDS
T09758
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129372290 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129372290 (rarga)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129372290 (rarga)
Nuclear receptors [BR:
pprl03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
129372290 (rarga)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
Motif
Other DBs
NCBI-GeneID:
129372290
NCBI-ProteinID:
XP_054905443
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All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MATNREQQVGHLTGFPPAVYPFPFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPDAFDD
QTECNESAPPPPPPPPPPPPALVVKQEAEDEDDSWGTENCSEPSPEEEDEDDDDDLGDEE
RDRGSDSDGEPWGVLDKLDGSRKGLVGRVQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggagcagcaggtgggtcacttgaccggcttcccgcctgctgtctac
ccctttcccttcaactccatgagaagccactccccgtttgacctgctcgccaacagcagc
ctgtttggaagatttggggctgaccttccaaaggagatggctgctctctcggtggagacc
caaagcaccagttcagaggagatggtacccagttctccatctccgcctcccccacctcgt
gtctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactacggggtcagt
tcctgtgagggctgcaagggtttcttccgtcgcagtatccaaaagaacatggtgtacacc
tgtcaccgagacaagaactgccagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaagtgctttgaggtcggcatgtccaaggaagcggtgcgcaatgacagaaac
aagaagaagaaggatgtgaaggaggaggtggtgctaccagagagctacgagctaagtgga
gagcttgaagaactggtcaacaaagtcagcaaagctcaccaagaaacatttccttcactt
tgccagctgggaaaatacaccaccaactctagctcggaccaccgtgttcagttggatctg
ggtctctgggacaagttcagtgagctctccaccaaatgcatcatcaagattgtggagttt
gccaagcgcctgccaggcttcaccaccctcactattgctgaccaaatcactctgctgaag
tcggcctgcctggacatcctgatgctgagaatctgcacacgctacacccctgaacaggac
actatgaccttctcagacggcctgactttgaaccgaactcagatgcacaacgctgggttc
ggaccactcacagacctggtgtttgcctttgccggccaacttctacccctggagatggat
gacactgaaactggtctcctcagcgccatctgcctcatttgtggagatcgcatggatctc
gaggagccagaaaaagtagataagctacaagagcctctactagaggctcttaagatctac
gcccgtcgccgtcgccccaacaagccccacatgttccctcgcatgttgatgaagatcact
gacctcagaggcatcagcactaaaggtgcagaaagagctatcactctgaagatggagatc
cctggcccgatgcctcctctgattagggagatgcttgagaaccccgacgcgtttgatgac
caaacagagtgcaacgagagcgcgccgcccccgccacctccgccgccaccgccgcctcca
gctttggttgtgaagcaggaggctgaggatgaggacgacagctggggcacagaaaactgc
agcgagccgtcaccagaagaggaggatgaggacgacgacgacgacttgggagacgaggag
cgagaccggggctcggacagtgacggggaaccttggggggttttggataaattagatggg
tcaaggaaaggccttgtggggagggtgcagtaa
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