Poeciliopsis prolifica (blackstripe livebearer): 129372374
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Entry
129372374 CDS
T09758
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pprl03009
]
129372374 (ddx49)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129372374 (ddx49)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
90S particles
Helicases
129372374 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
129372374
NCBI-ProteinID:
XP_054905611
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MSDLSSVGLSDWLVKQCKHLGLNKPTAVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEEPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQALALSNQ
PHVVVATPGRLADHIRSSNTFNMRKIKFLILDEADRLLEQGCTDFTKDLEVILSVLPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWESTSETRTVEELDQRYILTPDKVKDAYLVHLIQ
TFTDQHDDWSIIIFTNTCKSCQILTMMLQAFNFPTICLHSMMKQKQRFANLAKFKASVYK
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQTKTKLKEYPMEEKEVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELQKIRSQKKKFKQKIQESIQRQKHGQLKKRKCNKKAELTAL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttgtcgtccgtgggtctgtcggactggctggtgaaacaatgtaaacatctg
gggctcaacaaacccactgcggtccaggagaactgcatccctcccatcctggaagggcgc
gactgcatgggctgcgccaagacaggaagtgggaaaacggcggccttcgtgttgccggtg
ctgcagaaactgtcggaggagccatatggcatcttctgcctggttctcactcctaccagg
gagctggcctatcagattgcggagcagttcagagtcctgggaaaacctctgggtctgaga
gactgcatcgtcgtcggaggaatggacatggtgagccaggcgctggcgctgtccaaccag
cctcacgtcgtcgtggccacgccgggtcggctggccgaccacatccgcagctccaacacc
ttcaacatgaggaagatcaagttcttgattttggacgaagcggaccggctgctggagcag
ggctgcaccgacttcaccaaagacctggaggtgatcctgagcgtcttaccggccaaacgc
cagacgctgctgttcagcgccacgctgaccgacaccctgcaggagctgaagagcatcgcc
atgaataagccgttcttctgggagagcacgtccgagacgcggacggtggaggagctggac
cagaggtacatcctgactccagacaaggtgaaggacgcgtacctggtccacctgatccag
acgttcacagaccagcatgacgactggtccatcatcatcttcaccaacacctgcaagagc
tgccagattctgaccatgatgctgcaggcgttcaactttcctacaatctgtctgcactcc
atgatgaaacagaaacaacgattcgccaacctggccaagttcaaggccagcgtctataaa
atcctgattgcaacggatgtggcttccaggggtttggatattccaacagtccaggttgtc
atcaaccacaacaccccaggacttcccaagatctacatccacagagtcgggagaacagcg
agagcagggaggaacggcgtgtcaatcacactggtgacgcagtacgacatccatctggtg
cattcgatcgaggagcagaccaagacgaagctgaaggaatatcccatggaggagaaagaa
gtcctgaagatcctcacacaagtcaatgtgactcggcgagagtgtgaaattaggctggag
tcgacggactttgacgagaaaaaggagattaacaagcggaaacagctgatcctggagggg
aaggacccggacctggaggccaagaggaaagccgagctgcagaagatccggagccagaag
aagaaattcaagcagaagatccaggagagcattcagaggcagaaacacggacagctgaag
aagagaaaatgtaacaaaaaggcagagctgaccgcattgtaa
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integrated database retrieval system
