Poeciliopsis prolifica (blackstripe livebearer): 129372514
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Entry
129372514 CDS
T09758
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129372514 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129372514 (scn8aa)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129372514 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
HpsJ
GPHH
Motif
Other DBs
NCBI-GeneID:
129372514
NCBI-ProteinID:
XP_054905869
LinkDB
All DBs
Position
Unknown
AA seq
1966 aa
AA seq
DB search
MAAPLLAPPGPDSFKKFTRESLVVLEQRLKEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPKGMVAVPLEDLDPFYVNSQKTFIVLNKGKTIFRFSATPALYFISPFN
LVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDNFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINLNGTYLNNGSKG
FDWNEYINNDTNFYFLPGQLDALLCGNSSDSGRCPEGYMCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAAQKEEEFKAMLEQLKKQQEEQTAPPATSAGTVSEDAVEDDGGGRLSVSSSEMSK
LSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMN
QSLLSIPGSPFLSRHNSKSSIFSFKGRSKDMGSETEFADDEHSTVEECEERRGSLFSPYR
RSSYTGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEVKIDKAASDDSPTTEVEVKKKLSGS
LMVSVDQLNTSFGRKERANSVMSVITNTLAEELEESQRKCPPCWYKFSNTFLIWECSPMW
IKIKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGE
MLFKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLAATDDDGEPNNLQISVMRIKKGIAWIKAKVRILVASLLRKPPMEDEQKPLEDMC
DTKVNYIGNHTGADIKRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPI
AVGESDFENLNTEDFSSESDIENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYMEPE
PCWTDACVAKYKCCDVDITMGWGKSWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFE
DVYIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVS
LVANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFW
LIFSIMGVNLFAGKYYYCFNQTSEEYFDVEVVNNKTQCEALIRDNHTEVRWKNVKINFDN
VGAGYLALLQVATFKGWMDIMYAAVDSRNVEDQPKYEVNIYMYIYFVVFIIFGSFFTLNL
FIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGYVFDF
VTQQVFDISIMILICLNMVTMMVETDDQSEQTEMVLYWVNFIFIVVFTTEFLLKLFALRH
YYFTNGWNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIR
TLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIIL
FMITTSAGWDGLLLPILNYPPDCDPSLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVV
NMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFISFAKLPDFADALEHP
LRVPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVAANP
SKVSYEPITTTLRRKQEDVSAKIIQNAYRAHLIRRGIIFKRHILSSNKLENGGTNQEKKE
STPSTASLPSYDSVTKPDKEKQDKSKEDWARKDKDKNQKDEWESKC
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgatagcttcaagaagttcacgagggaa
tctttggtggtccttgagcagcgactcaaagaggagaagaacaagaagccacccaagcag
gacagcagctaccgcgacgacgatgacgagaataagcccaaacccaacagcgacctggag
gccgggaagagcctgccctacatctatggggacatccctaaaggaatggtggcggtacca
ctggaggatttggatccgttctacgtgaactctcaaaaaacgtttatagtgctaaataaa
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttcaat
ctggttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatccccctgagtggtcaaaa
caagtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatcaccgca
cgtggattctgtatagataattttacattcctaagagatccatggaattggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacgttcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggagctctgatccagtccgtgaagaagctttcagatgtgatgatcctcaccgtc
ttctgcttaagcgtgttcgccctgatcggcctgcagctcttcatggggaacctgcggcag
aagtgcgtcatctggccaatcaacctcaacgggacttacctgaacaacggcagcaagggc
tttgactggaacgagtacatcaacaacgacaccaatttctacttcctgcctggtcagctg
gacgctctgctctgtggaaacagctcagactctggccgctgcccagagggctacatgtgc
atgaaagctgggaggaatccaaactatggctacaccagcttcgacagcttcggctgggcc
ttcctggctctcttccgactcatgacgcaggacttctgggagaacctgtacatgctgacc
ttgagggctgcgggaaagacctacatgatcttcttcgtcttggtgatctttgtgggctcg
ttctacttggtgaatctgattctggctgtggtagccatggcttacgaggagcagaaccag
gccaccatggaggaggctgcgcagaaggaagaggagtttaaggccatgctggagcagctc
aagaaacagcaggaggagcagactgcgccccctgccacctctgctggcacggtgtcggag
gatgcggtggaggacgacggaggaggccgtctgtccgtcagctcttcggagatgtcaaag
ctcagctccaagagtgccaaagagcgccgcaaccgcaaaaagaagtggcggcagaaggag
caggagaaggagaaaggcgacagcgagaagtttgtgaagtcagagtcggacgacggcagc
aagagaagccgcttccgtttccctgataaccgcttgggtcgaaagtcttccattatgaac
cagtccctcctgagcatccccggttcgcctttcctctcccgtcacaacagcaagagcagc
atcttcagcttcaagggccgcagcaaggacatgggctccgagaccgaatttgccgacgac
gagcacagcacggtggaggagtgcgaggagcgccgcggctccctcttcagcccctaccga
cggagcagctacaccggtttccacgggaagaggaacagcacggtggattgcaacggagtg
gtgtcgctcatcggcccagggcccggtggacgccttctgcctgaggtgaaaatagataag
gcagcttctgacgacagtccgactactgaggttgaggtgaagaagaagctgtcgggctcc
ctgatggtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaacagt
gtcatgagcgtcattaccaacacattagcggaggaactggaggagtctcagcgcaagtgt
ccgccatgctggtataagttttctaacacattcctgatctgggaatgcagcccaatgtgg
attaagatcaaggagattgtaaacttgatagtcatggatcccttcgtggacctggccatc
actatctgtatcgtcctcaacaccctcttcatggccatggagcactaccccatgacgccc
gactttgaggacatgctgtctgtaggcaatctggtgttcacagggatctttgcaggggag
atgcttttcaagcttgtggctatggatccgtactactatttccaggaggcctggaactgt
tttgatggattcattgtgacgctgagtttagtggagctggctctggctgatgttgaaggc
ctctctgtgctgcggtcattccgattgctgagagtgtttaagttggccaagtcctggcca
actctcaacatgctgatcaagattattggtaactcggtgggagccttaggaaacctcact
ctggtgctggccatcatcgtcttcatttttgctgtggtgggcatgcagctgtttggaaag
agctacaaagactgtgtgtgtaagattgctgctgactgcgagctgcctcgctggcacatg
aacgacttcttccactcgttcctgatcgtcttccgggtgctgtgtggagagtggatcgag
accatgtgggactgcatggaggtggcggggcaggcaatgtgcctcattgtgtttatgatg
gtcatggtcatcggtaacctggtggtgttgaatctgttccttgccttgctgctgagctcg
ttcagtgcagacaacttggctgcgacggatgacgacggcgagcctaacaacctccagatc
tctgtcatgcgcattaaaaagggcattgcctggataaaagccaaggtgcgcattctggtg
gcgagcctgctgcggaaacctcccatggaggacgagcagaagcctctggaggacatgtgt
gacaccaaggtgaactacattggcaatcacacgggggccgacatcaaacgtgacctggat
tacgccaagaatggaaatgggaccaccagtggcatcggtagcagcgtgggcaagtacatg
atcgatgaggaccacatgtcattcatccacaaccccaatctcacagtgtgcgtgcccatt
gctgttggagagtctgactttgagaacctcaacacagaggatttcagcagcgagtcagac
attgagaacagcaaagagctggacgacaccagctcgtcggaaggcagcaccatcgacatc
aagccagacgtagaggaggtggtggtggtggagacggtggaggaatacatggaaccagag
ccatgctggacagacgcctgcgtggccaaatataaatgctgcgacgttgacatcaccatg
ggctgggggaagagttggtggttcctgaggaaaacctgctacctgatcgtggagcacaac
tggttcgagaccctcatcatcttcatgatcctcctcagcagtggtgccctggcttttgag
gatgtgtacattgagcagaggaagaccattcgcatcattttggagtacgccgacagggtt
ttcacctacatcttcatcctggagatgttgctgaagtgggttgcctatggctttgtcaag
tatttcactaatgcttggtgctggctggacttcttcattgtggatgtgtctatagtcagc
cttgtagctaatgcgctgggctactccgatctagggcccattaaatcactcaggacacta
agggccttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtcaac
gccttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttgg
ctgattttcagtatcatgggggtcaacttgtttgcgggcaagtactactactgtttcaat
cagacatcagaggaatattttgatgtcgaagttgtcaacaacaagacccagtgtgaggcg
ctcattagagataaccacactgaggtcaggtggaagaacgtcaagatcaactttgacaat
gtgggcgctggctacctcgccttgttgcaagtggccacattcaaaggttggatggatata
atgtacgctgcagtggattctagaaatgtggaagaccagcccaaatatgaagtcaacatt
tacatgtacatctacttcgttgtcttcatcattttcgggtccttcttcaccctgaacctc
ttcattggtgtgatcattgacaacttcaaccagcagaagaaaaagtttggaggtcaggat
atcttcatgaccgaggagcagaagaagtactacaacgccatgaaaaagttgggctccaaa
aagccacagaagcccatcccacgaccgcagaacaagatccagggatacgtgtttgacttt
gtgacgcagcaggtctttgacatctccatcatgatactgatctgcctcaacatggtcacg
atgatggtggaaacagacgatcagtcagaacaaacagaaatggtcctctactgggtcaac
ttcatcttcatcgtggtcttcaccacagagttcttgctgaagcttttcgcgctacgccat
tattacttcaccaacggatggaatatcttcgacgtggtggttgtcatcctctctatcgtc
ggtatgttcctggctgacatcattgagaagtactttgtgtcaccgaccttgttcagggtc
atcaggttggctcgtattggccggatcctgcgtctgatcaaaggagctaaaggcatccgg
actttgctcttcgccttaatgatgtccttgccggccttgttcaacatcggcctgctgctc
ttcctggtcatgttcatcttctccatctttggcatgtccaacttcggctatgtaaagcac
ggagcgggtatcgacgacctgtacaacttcgaaacctttggcaacagcatgatcatcctg
ttcatgatcaccacgtctgccggctgggacggcttgctgctgccgattctgaactacccg
ccggactgcgaccccagcttggagaaccctggcacttcggtgaagggcgactgtgggaat
ccctcagtggggattttcttttttgtcatgtacattattatttctttcctgatcgtggtt
aacatgtacattgccataattctggagaacttcagcgtggccactgaggaaagtgccgat
ccgctcagtgaggacgactttgagaccttctacgagatctgggagaaatttgatcccact
gcctcccagttcattagtttcgccaagctgcctgactttgccgacgctttggagcacccg
cttcgtgtgccgaagcccaacactatagaactaatcgccatggacatgcctatggtgagt
ggcgatcgcattcactgcctcgacatcctgtttgccttcacgaagcgtgtgctgggcgac
agcggcgagctggacatgctgcggacgcagatggaggagcgcttcgtggccgccaacccg
tccaaggtgtcgtacgaacccatcaccacgacgctgcgccgtaagcaggaggacgtatct
gccaagatcatccagaacgcctaccgcgcccatctcatcaggcgcggcatcatcttcaag
cggcacattttgtccagtaacaagcttgagaacggcgggaccaaccaggagaagaaggag
agcacgccatccacggcctctctcccgtcctacgacagtgtgaccaaacctgacaaagag
aagcaggacaaaagcaaggaggactgggccaggaaagataaggacaaaaaccagaaagat
gagtgggagtccaaatgttag
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integrated database retrieval system
