Poeciliopsis prolifica (blackstripe livebearer): 129372537
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Entry
129372537 CDS
T09758
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129372537 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129372537 (exosc10)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
129372537 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
Motif
Other DBs
NCBI-GeneID:
129372537
NCBI-ProteinID:
XP_054905912
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MMKASKKKESTNAGSLDDNPDASREEKSDLCPGFKDVDAFVKYGLGSVLSATKASAGLPQ
AGDEYDFYRSFPGFQEFCESQGDKLLHCMSQIMQHHGCRSHIRDRNKLTGLEERFDLVVD
SNDVILERAGILLDEADGVNRSQNPVMPAGFQPPKIVVSSWNRKGFSSGSRSETFRLLHA
KNVARPQLKFKEKVDNSNTPFVPKIFIKPNALKPLPSYFSNKQIRKERPEDLDVPAALAD
FLHQQRTQEHVEDMFAHPYQSELDHLTLPESLLSKPEPQMYKPMAETKLSFVDSLEDLVA
LNEKLCQLSEFAVDLEHHSYRSFLGITCLMQISTREEDFIIDTLELRSEMHILNEAFTDP
TIVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKNFCNVNSDKRY
QLADWRIRPLPEEMIEYARADTHYLLYIYDCVRAQLLESNHGQPGLLQCVWNKSKDVSLK
KYVKPIFTEESYLELQRKQKRSFNTQQLTTFRLLYAWRDKLARQEDESTGYVLPTHMMIK
ISEELPKEPQGIIACCNPVPPLVRQQVNELHLLVQQGREMPLLKAEMAAQKKKGLTTIKK
AGVPLFGPHDTSRGSESSYPQLIADEVPVKQGMLFSEEDNKMDVDEQKISSLLAPAKISL
FQELETPAGQTSLSVAQMKARSIIESFENPFRMYLPSTGAHVNKNAKFDPSSKIFEISKR
WKLQSAEQQQKEVEVKKKSKEEAKQKAKKLSEERSKAKQSYQESLRNIVPVRQQAADSKD
GGRKKARGGSEVGEMTPKPSKKLMKSAEKSPKTNPPSEETFKPFDYAQSDLKVFDGSKAK
DNTQFDPNRQAQDFRKKRFPQGQKKNSSGNKSMSYMKGKSERGLRHAWPKR
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagcctccaagaagaaggaatccaccaatgctggctccctggacgacaatcca
gacgccagcagagaggagaaaagtgatctttgtccaggctttaaagacgtagacgccttc
gttaaatatggtttggggtctgtgttgtcagccactaaagcctcagctggcttacctcaa
gcaggagatgaatatgatttctaccgaagctttccaggcttccaggagttctgtgaaagt
caaggagacaagcttctgcactgcatgagccagataatgcagcatcatggctgcagatct
cacataagggaccggaacaagctcaccggactggaggagaggtttgacttggtcgtggac
tcaaatgatgttattcttgaaagagcggggattctcctcgacgaagccgacggggtaaac
aggagccagaatcccgttatgcctgccgggtttcagcctccaaaaattgttgtgtccagc
tggaatcgcaagggtttcagctctggcagccgatcggagacgttccgactccttcacgcc
aagaacgttgcaaggccccaactgaaattcaaggagaaagttgacaacagcaatacaccg
ttcgttcccaagattttcatcaagccgaatgcactgaagccacttccgtcatatttctca
aacaagcaaatacgcaaagagaggccagaggacctcgacgtcccggctgccttggctgac
tttctccaccagcagagaactcaggaacatgtcgaagacatgtttgcgcatccataccag
tctgaactggaccatctcaccttaccagaaagtttactgtccaagccggagcctcagatg
tacaagccgatggccgagacaaagctttcctttgttgactcactggaggacctggtcgcg
ctgaatgagaagctgtgccaattatctgaatttgcagtagatctcgagcaccattcctac
cggagcttcctcggcatcacctgcctgatgcagatttccaccagagaagaggacttcatc
atcgacactctggagctccgcagcgaaatgcacattctgaacgaggcgttcactgacccg
actatcgtaaaagtttttcacggtgctgattctgacattgagtggctccagagggacttt
ggcttgtatgttgtcaacctttttgacacccatcaggcgagtcgagccctgaacctggcc
agacattctctggaccatttgctgaaaaacttctgcaacgtgaactcggacaaacgctac
cagctggctgactggaggattcgccccttgccagaagagatgatcgaatatgctcgagcg
gacacgcactatctcctctacatctacgactgcgtgcgggcgcagctgttggagtcgaac
cacggccagccgggcctgttgcagtgcgtctggaacaaaagcaaagacgtttcgctgaag
aaatacgtgaagccgatcttcaccgaggagtcgtatttagagctgcagaggaagcagaaa
aggtcttttaacacccagcagctcaccacattcaggctgctgtacgcctggagagacaag
ctggccaggcaggaagatgaaagcaccggatacgtccttcccactcatatgatgatcaaa
atatccgaagagctgcccaaagagccgcagggcatcatcgcctgctgtaaccccgtcccg
ccgctggtgaggcagcaggtcaacgagctccacctgttggtgcagcaaggcagggaaatg
ccgctcctgaaggctgagatggcagctcagaagaagaaaggactcacaaccatcaaaaag
gcaggagtcccgctgtttggtccacatgatacgtccaggggctctgagagcagctaccct
cagctcattgcagatgaagtcccagtgaaacaaggaatgctgttctcagaggaggataac
aaaatggatgttgatgagcagaaaataagctccttgttggctccagccaaaatctccttg
tttcaggagctggaaactcctgctggccaaacatccctctccgtagctcagatgaaagcc
aggagtatcatcgagtcttttgaaaatcctttcagaatgtatctgccctccaccggcgcg
cacgtcaacaaaaacgccaagtttgacccgtcttcaaaaatattcgagatcagcaagaga
tggaaactgcagagtgctgagcagcagcagaaagaggtggaggtcaagaagaaatcaaag
gaagaagcaaaacaaaaagcaaagaaactgtcagaggaaagaagcaaggctaaacagagc
taccaggagtctctgcggaacatcgtccctgttcgccaacaagcagcagattcaaaagat
ggtggaaggaaaaaagcgaggggtggcagcgaggttggagagatgactcccaaaccgagt
aagaagctgatgaaatcagcggagaaatccccaaagaccaaccctccttctgaagaaacc
ttcaagccctttgattatgctcagtcagatcttaaagtttttgatggctccaaagctaag
gacaacacgcagtttgatccaaatcgacaagcccaggattttaggaaaaagagatttcct
caaggacaaaagaagaactcttcaggaaacaaaagcatgtcgtacatgaagggcaaatca
gaaagaggtttgcggcatgcctggcccaagagatag
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