Poeciliopsis prolifica (blackstripe livebearer): 129372641
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Entry
129372641 CDS
T09758
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprl03041
]
129372641 (cpne1)
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129372641 (cpne1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
129372641
NCBI-ProteinID:
XP_054906030
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All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGPVEITAPTPGNANRQAPTASIPTVQ
SGAGGRSSSHGNQGFTNTPASVTAVSSSQDQPTNKAAATMANVVPSFPNNYSSTPTISTA
LSSLNAGPPPISALANMPSMPPMPTLPTISVPPPVSTLPPVPSVTPLSQGPPVPPIAHLP
HMPSLPPFNPSLPPPAGLGSGLPLGTPNPMLFNPLSPLASLGLQAHMKAAAVVATGAGGS
NPDELYVLLQNLPFSCSEMEVRDFFRGLGVDGVRLQRDGQGRPNGRAIVKFFLPQDSFEA
MKRGGGMMGQRFIEISPGSEHQWASLSDSRMSHVSHNISKLHNEAHDHQNRRINVGPGGR
DQRERSRSPHRQEFCVYLKGLPYEANKRQIKEFFNNLAIVEDSVFISYGPNGRATGEGFL
EFKSEQDYKAGLGAHMQYMGSRFIQVHPISRKGMIEKIDAIRKREAGQGDGKNPDGMKTP
RNCVHISNIPYNISKKDVRAFFDGIGIYEETLKVLTDGNGNGLGQAILQLRTEEDARKTE
RLHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQSHQNQNQHQQAPPNPQQPQI
NPFAAMSGDEFTFLRNTMGNLNNNPFVTPFSAPGNGLAGPPPMPPLAAGLGEVNLGVAPP
LVPGIPGTPILEPPGFRPGAAGGAPFGQDGLRGLVPFDNANRKGGGGGQNRGGGANTTTN
NQGLPSGGAAGGQQVFTPGSEALRNPSAPGGSNNPNNQRSAAGPTIVKLQNMPFTVTVDE
IMDFFYGYQVVPGSVCLQFNDKGMPNGEAMVAFQSQDEATAAVMELNDRPIGARKVKINL
I
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagtcatcaggctgcagggtctgcccatagtggctgggaccatggacatcaga
cacttcttctccggcctaaccattcctgatgggggagttcacatcgtgggtggggaacat
ggtgaagccttcattgtgttcgccacagatgaggatgctcgactaggaatgatgcgtaca
ggcgggtccattaaaggctctaaagtgtcactgttactcagtagcaagacagaaatgcag
aacatgattgagcttagccgacgaagatttgaagctggagcagggccagtagagataaca
gcaccgacacctggaaatgctaaccgtcaagcaccaacagcctccataccaacggtgcaa
agtggggcaggagggagatcgagtagccatgggaatcagggttttacaaacaccccagct
tcagtgactgctgtaagctcctcacaagaccaaccaactaacaaagcagcagcaaccatg
gccaatgtggtaccaagcttccccaataactatagttcaactcccacaatttccacagct
ctatcatcacttaatgctggtcctccacccatctctgctcttgccaacatgccctccatg
cccccaatgcccacactgcccactatttcagttcctcctccagtatccacccttccgcct
gttccttctgttacacctttgtcccaaggtcccccagtgccacctatagcccaccttcct
catatgccctccctacctcccttcaacccctccctacctccccctgcaggactgggctca
ggtctgcctcttggaacccctaatcccatgttgttcaaccctctttctccattggcctca
cttggccttcaagctcatatgaaagctgcagcagttgttgccactggagcagggggatca
aaccctgatgaattgtatgtcctcctccaaaatctcccattctcctgctcggagatggaa
gtcagggacttctttcgaggtcttggtgtagatggggttcgtctacagagggatgggcag
ggtcgaccgaatggtagggcaattgtcaaattcttcttgccccaggatagttttgaagct
atgaagcgaggtggtggcatgatgggccaaagattcattgagatcagtccgggctctgag
catcagtgggccagcctcagtgatagtaggatgagccatgtgtctcataatattagtaaa
ttacataatgaggcccacgatcatcagaaccgccgcatcaatgttggtcctggaggcaga
gatcaacgagagaggtcacgatctcctcacaggcaggagttttgtgtctatctgaaaggt
ctgccttatgaggccaataagagacaaattaaggaatttttcaacaatttggccattgta
gaagatagtgtctttatttcttatggcccaaatgggcgggctacaggggagggctttctt
gaatttaagtcagaacaggactacaaggctgggcttggagctcacatgcaatacatgggc
tcccgctttattcaggtccacccaataagccgaaaaggaatgatagaaaagattgatgct
atccgcaaacgtgaagcaggacaaggtgatggcaagaacccagatggcatgaaaacacca
agaaattgtgtccacattagcaacattccctacaacatttccaagaaggatgttcgtgcc
ttttttgatggtataggcatatatgaggaaacactgaaagtcctgacagatggtaatggc
aatggtttggggcaagccatcctacagctgagaactgaggaggatgctcgcaaaactgaa
aggctacaccgccaaaaactcaacggtcgagatgccttcgtccatctggtgacctttgag
caaatgaaggagattgaacgaaatcctccacctcaaaacaagcgaggtcaacgcaaccaa
agccatcagaaccaaaatcagcaccagcaggcaccacctaatccccagcagccccagatt
aatccttttgcagccatgagtggtgatgaatttacctttcttagaaacaccatgggcaac
ctcaacaataatccgtttgttacgccattctctgccccaggtaacgggcttgcaggtcct
cctcccatgcctcctctggcagcagggttaggggaagtaaatctcggtgttgctcctcct
ctggttccaggaatacctggcactcctatcttggagccacctggttttcgccccggggct
gccggaggagctccttttggccaggatgggcttcgaggcctggtaccttttgacaatgcc
aatagaaagggaggtggaggaggacagaaccggggtggaggggctaacaccaccaccaat
aaccagggacttccaagtggtggagcagcaggtggacagcaagtgtttactcctgggagt
gaagccctacggaacccttcggcccctggaggatccaacaaccccaacaatcagcgcagt
gctgctggtccaacaatcgtaaagcttcagaacatgccattcactgtaactgtggatgag
attatggacttcttctatggttaccaggtggtaccaggctcagtctgcttacagttcaat
gataaaggcatgccaaatggggaagcaatggtggctttccagagtcaagatgaggccact
gctgcagtaatggaacttaatgaccgacctattggagcacgtaaagttaaaataaatctg
atttaa
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