Poeciliopsis prolifica (blackstripe livebearer): 129372778
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Entry
129372778 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129372778
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129372778
BRITE hierarchy
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
PRY
zf-B_box
zf-RING_2
zf-C3HC4_3
U-box
zf-RING_5
zf-rbx1
zf-Nse
zf-RING_6
zf-ANAPC11
Prok-RING_4
DUF4618
UPF0242
DUF1043
Lipoprotein_2
Motif
Other DBs
NCBI-GeneID:
129372778
NCBI-ProteinID:
XP_054906257
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MASRPEKDLCCPVCQDGFKDPVVLSCSHSFCKECLKNWWRQKPAGECPVCKRKSSREEPT
LNPALKRLCESFLEQREQKASESLCSLHSEKLKLFCLDHQQPVCLVCRDSEKHIKHRFRA
IDEAAQDHRENLKTSLEPLKKKLEQKKEVKEEFDQTAEHMMVQARHTERQIVEQFKKLHQ
FLAEEEEARLAALREEEEQKRGMMEEKMEALSREIAALSDTVRATEEELRAEDVSFLHNY
KAAVERVQRCPLLEDPQLPSGALIDQAKHLGNLAFNIWSNMKDMVTYTPLVLDPNTANPE
LLLSEDLTTLTYGRNSSFLIIQRGFMTCGGLF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagaccagagaaggacctctgctgtccggtctgtcaggacggctttaaggat
ccggttgttctgtcatgcagccacagcttctgtaaggagtgtctgaagaactggtggaga
cagaaaccagcaggagagtgtccagtttgcaagaggaaatcttcaagagaggaaccgact
ttaaatccggctctgaagagactctgtgaatcattcttagagcagagagagcaaaaagct
tcagagagtctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcag
cagccagtttgtctcgtctgcagagattcagaaaaacacatcaagcacagattcagagcc
atcgatgaagctgctcaggatcacagagagaatctgaaaacatctctggagcctttaaag
aagaaactggagcagaagaaggaagttaaagaggagtttgatcagacagcagaacacatg
atggtccaggcccgacacacagagaggcagattgttgagcagtttaagaagcttcatcag
tttctagcagaggaagaggaggccaggctggctgcactgagggaggaagaggagcagaag
agagggatgatggaggagaagatggaggctctgagcagagagatagcagctctttcagac
acagtcagagccacagaggaggagctgagagctgaagacgtctcattcctgcacaactac
aaggctgcagtggaaagagtccagcgctgccccctgctggaggatccacagctgccctca
ggagctctgatagaccaggccaaacatctgggcaacctggccttcaacatctggagcaac
atgaaggacatggtgacctatactcctctggttctggacccaaacacggcgaatccagaa
ctcctgctgtctgaagatctgaccactttgacatatgggaggaacagcagcttccttata
atccagagaggttttatgacttgtggcggtctgttctga
DBGET
integrated database retrieval system
