KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129372837
Entry
129372837         CDS       T09758                                 
Symbol
sdc4
Name
(RefSeq) LOW QUALITY PROTEIN: syndecan-4
  KO
K16338  syndecan 4
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04512  ECM-receptor interaction
pprl04514  Cell adhesion molecule (CAM) interaction
pprl04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129372837 (sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    129372837 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129372837 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pprl00535]
    129372837 (sdc4)
Proteoglycans [BR:pprl00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   129372837 (sdc4)
SSDB
Motif
Pfam: Syndecan WBS28 AA_permease_2
Other DBs
NCBI-GeneID: 129372837
NCBI-ProteinID: XP_054906341
LinkDB
Position
Unknown
AA seq 200 aa
MIFPLCLVLMLSASVLSESQVRETETWMPMSTTQTAAMSTDGGSMEASGDSSNGSDFGFS
DDEDDYYDEEYDVSGSGEGATESRPSEKPDFDNRIPDLLNPVTPKDVDIVKDRNEIPELG
SEPDAKEENPSNVLMSQAKGDGVFDKPEVLAAVIASCAVCLMFAVLLILLLIYRMKKKDE
GXDLGKKPIYKKAPTTEIYA
NT seq 603 nt   +upstreamnt  +downstreamnt
atgattttccccctgtgcctcgtgctgatgctgtccgcctccgtcctctcagagtcgcag
gtccgggagacggagacatggatgcccatgagcaccacgcagacggctgccatgtcgacg
gacggcggcagcatggaggcgtcgggagactcttcgaacggctccgactttggtttctcg
gacgatgaagacgattattacgatgaagagtacgacgtgtccggatccggagaaggagca
accgaatccagaccttcagagaagcccgacttcgataaccggatccctgacctgctgaac
ccggtgacaccaaaagacgtcgacatcgttaaggacagaaacgagattcctgagctgggc
agcgaacccgacgccaaggaggagaacccgtccaacgtcctgatgtcccaggccaaaggg
gacggcgtcttcgacaagccggaggtcctggcagctgtgatcgcgagctgcgccgtctgc
ctcatgttcgccgtgctcctcatcctcctcctcatctaccgcatgaagaagaaggacgaa
ggcnacgacctgggcaagaagcccatctacaagaaggcccccaccacagagatctacgcg
tag

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