Poeciliopsis prolifica (blackstripe livebearer): 129372880
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Entry
129372880 CDS
T09758
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129372880 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129372880 (smarcd1)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129372880 (smarcd1)
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129372880 (smarcd1)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129372880 (smarcd1)
PBAF complex
129372880 (smarcd1)
GBAF(ncBAF) complex
129372880 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129372880
NCBI-ProteinID:
XP_054906418
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARGGFQSTPTAGGGGAMGPGPPVPGAAPGMGPGTPSGRMGPTSGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTITDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcaatcaacaccgactgctggtggcggtggagcaatggga
cctgggccaccggtaccaggcgcagcgccaggtatgggacctgggactccctctggaaga
atgggaccgacatcgggcgcacagaaccacatgtaccgctctccgatgcccgggcctggg
tacccgagaccgggcatgcccccatccagccgtatgaccccgcagggccccgccatgggc
ccaccgggttacggcagcagccccgtgtctcgccctgggatgcccggcgtaatggacccg
tcccggaaaaggcccgctcctcagcagatccagcaggttcagcaacagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagagagctg
gtcccagagtctcaggcttacatggatcttctggcttttgagaggaagctggatcagacc
atcatgcgcaaacggctcgacattcaggaggccctaaaaaggcccataaagcaaaagaga
aagctcagaatttttatatccaacaccttcaatcctgcgaagcctgatgctgaggatgga
gaaggaacagttgcatcatgggagctgcgtgttgaagggcgactattagaagatactgct
gtgtccaagtatgaagctaccaaacaaaaacgaaagttctcttccttctttaagtcactt
gtgattgaattggataaagacctgtatggaccagataatcaccttgtggaatggcacagg
acggccactacccaggagacggatggtttccaggtgaagaggccaggtgatgtgggagtt
cgctgcaccgtcctgctcatgctggattaccagcccccccagttcaagctggacccccga
ctggcccgcatgttgggtatccacactcagaccagacctgtcatcatccaggctctgtgg
cagtacgtcaaaacacacaaactccaagatccgcatgagcgcgagttcatcaactgtgac
aaatacctccagcaaatttttgaaacgcagcgaatgaagttctccgaaatcccacagcgc
ctgcatgctctgctgatgcctccagaaccaatcatcatcaaccatgtgatcagtgtggat
ccaaatgatcaaaagaagactgcttgctatgacattgatgtggaggtggatgacacgctg
aagacccagatgaactcattcctgctctccacagcaagtcagcaggaaatagcaggattg
gataacaagatccatgaaactattgagaccatcaaccagctgaaaacccagagggagttc
atgttgagctttgccagggatcctcagggctttatcaacgactggcttcagtcccaatgc
agggacttcaagactattacagatgttgtaggaaacccagaagaggagcggagagcagag
ttttactaccagccgtgggctcaggaggcggtgtgtcgctacttctactccaaggtccag
cagaggaggcaggagttggaacaggcgcttggaatcaggaacacttga
DBGET
integrated database retrieval system
