Poeciliopsis prolifica (blackstripe livebearer): 129372995
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Entry
129372995 CDS
T09758
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129372995
03041 Spliceosome [BR:
pprl03041
]
129372995
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129372995
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129372995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
129372995
NCBI-ProteinID:
XP_054906637
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDDEQPRTLYVGNLSRDVTEPLILQVFQQIGPCKSCKMINDTAGNDPYCFVEFYDHRHAA
ASLAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKA
TYENNSKHLSFDDVMSQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPDKGY
SFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWGKETPDMMNSMQQVSMPQQNKIGFAAAQ
PYNQWGQWYGNGPQISQYVPNGWQVPTYGVYGQAWNQQGFNHLPASAGWTGMSAISNGGV
MEPTQGLNGSMLANQPGMGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaacaacccagaaccctgtacgtaggaaatctgtccagggatgtcaccgag
cccctcattctacaggtcttccaacagataggaccttgtaagagctgtaaaatgatcaat
gatactgctggaaatgatccgtactgctttgtggagttctatgatcacaggcatgctgct
gcctcattggcggccatgaatggaaggaaaatattgggtaaggaggtcaaagttaactgg
gccacaacaccatccagccagaaaaaagacacaagtaatcactttcatgtcttcgtcgga
gacctcagtccagaaataacaacagaagacgtcaaagctgccttcgcccctttcggcagg
atatcggatgctcgcgtcgtgaaagatatggctacaggaaaatctaaaggctacggcttt
gtgtctttcttcaataaatgggatgcagagaatgccattcagcacatggggggtcagtgg
ttagggggcagacagatacggaccaactgggccacaagaaagccccctgctcccaaggcc
acctacgagaataactccaagcacctgtcctttgatgacgtcatgagccagtccagcccc
agtaactgcaccgtgtattgcggtggggtcagcacaggactcacagagcaactgatgaga
cagaccttctccccattcggacagatcatggaagtcagagtttttccagataaaggctat
tcatttgtgaggtttaactcccatgaatcagcggcccatgccatcgtctccgtcaatggt
tcttcaatcgagggccacatagtaaagtgctactggggtaaagagacgccagacatgatg
aactccatgcagcaggtgtcgatgccccagcagaacaagattggcttcgccgcagcccag
ccctacaaccagtggggccagtggtatggcaacgggccccagatcagccagtacgtcccc
aacgggtggcaggtccccacctacggcgtctacggccaggcctggaaccagcagggcttt
aatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggtggggta
atggagcccacacagggattgaatgggagtatgctagccaaccagcccggtatgggagcc
acaggataccccacgcactga
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