Poeciliopsis prolifica (blackstripe livebearer): 129373012
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Entry
129373012 CDS
T09758
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129373012 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129373012 (lsm1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129373012 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
129373012 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129373012
NCBI-ProteinID:
XP_054906664
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDDIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEMDVDKPCDTILQQVSIEEILEEQRLQQQAKQETEKVKMQVLKDR
GLSIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgtgccagggacggcgagcctcattgacgacatcgacaaaaagcacctggtg
ttgctccgagatggcagaactctgattggttacctcaggagcatcgaccagtttgccaat
ttggtgtttcaccagacggtggagcgcatccacgtggggaaaaagtttggagacatcccg
agaggcatcttcatcgtgagaggggaaaatgtggttctgcttggagagatggacgtggat
aagccctgcgacaccatcctgcagcaggtctccatcgaagagatcctagaggagcagcgg
ctgcagcagcaagccaagcaggagacggagaaagtcaagatgcaggtcctgaaggaccga
ggcctctccattcccaaagcggataacttggacgagtactaa
DBGET
integrated database retrieval system
