Poeciliopsis prolifica (blackstripe livebearer): 129373043
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Entry
129373043 CDS
T09758
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129373043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129373043
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129373043
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129373043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD_NSD
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
129373043
NCBI-ProteinID:
XP_054906726
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MARPGSGLLVPMNGVGYPPQNLARVVVWEWLNEHGRWRPYSAAVCHHIENVLKGDARGSV
VLGQVDAQLSPYIIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMSQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKHYGGTAGNPGATGAL
GGVRQSNTFAGTSLWSPTSGSSGANHNNISVGGGQSKAEQVQSPLSSANFPCSPVMPSLS
SSHGHRALTINGQNNLNRPGTQRISMGTTRGAIPPGVPALPVKNLTGSGPVHPALAGMTG
ILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGINGMRRKTKKKHLKRGKNPEDVVRR
YTEKIKVAPDEDCTICMERLAMSSGYEGILQHKGIKPELVGKLGKCGHMYHLLCLVAMYN
NGNKDGSLQCPTCKTIYGEKTGTQPPGKMEYHVIPHSLPGYSECKTIRIVYDIPAGIQTI
EHPNPGKKFSARGFPRHCYLPDNEKGRRVLKLLIMAWDRRLIFTIGTSSTTGESDTVVWN
EIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccccgggtcggggctcctggtgcccatgaacggcgtggggtacccgcctcag
aacctggccagggtggtggtctgggagtggctgaacgagcacgggcgctggaggccgtac
agcgcggcggtgtgccaccacatcgagaacgtgctgaagggggacgccaggggaagcgtg
gttctcgggcaggtggatgcccagctctccccttacatcatcgacctgcagtctatgcac
cagtttcggcaggacacaggcaccatgaggcccgtgcagaggaacttctacgagccgtcg
tcggccccagggaaaggcgtggtgtgggagtgggagaacgacaacggctcgtggacgccg
tacgacatggagatctgcgtgaccatccagaatgcctacgagaagcagcacccgtggctg
gacttgacctctctgggcttctgctacctcatcgacttcaacagcatgtcccagaccaac
cggcagagtcagcgcaagcgccgcctccggagacgcatggacctggcgtacccgctcatc
atgggctccattcccaagtcccagtcgtggcccgtgggtgccagctctggccagccctgc
tcgtgccagcagtgcatcctggtgaacagtacaagagctgcctccaacgccatcctggcc
tcgcagcggcgtaagcactacggagggacggctggcaacccgggcgccacgggagccctc
ggcggcgtgcggcagagcaacaccttcgctggaacctccctgtggtccccgacgtccggc
tcctccggtgccaaccacaataacataagtgtgggaggtgggcagtcgaaagccgaacag
gtgcagtcgccgctgtcttctgccaacttcccctgctccccggtgatgccatcgctttca
tcctcccacggtcaccgcgcgctcaccatcaacggacagaacaatctgaaccggccaggc
acccagcgcatttccatggggaccaccagaggagccatcccacccggtgttcctgcttta
ccagtgaaaaacctgaccgggtctggacctgtgcacccggcgctagcaggcatgacaggt
atcctgatgtgcgctgcaggtctacccgtttgtctgactcgagctccaaagcctatactg
cacccaccacccatcaacaagagtgacatgaagcctgtgccagggatcaatggcatgcgg
cgcaaaaccaagaagaagcacctgaagagaggtaaaaacccggaggatgtggtccgaaga
tacacagagaagattaaagtggcgccagacgaggactgtaccatctgcatggagaggctg
gcgatgtcatcgggctacgaaggcatcctgcagcacaaaggcatcaagccagagttggtg
ggcaaacttggcaaatgtggtcacatgtaccatctgctgtgcctggtggccatgtacaac
aatggcaataaggacggcagcctgcagtgcccaacgtgtaagacaatctacggggagaaa
acaggcacccaaccccctgggaagatggagtaccacgtcatcccccactctctgcccggc
tactcggaatgcaaaactatccgcatcgtgtacgacatccccgccgggatccagaccatc
gagcaccccaaccccggcaagaagttcagtgcgagaggcttccctcgacactgctacctc
cccgacaacgagaaaggcaggagggtccttaaactcctcatcatggcgtgggaccgccgc
ctcatcttcaccatcggcacatccagcaccacgggagagtcggacacggtcgtgtggaac
gagattcaccacaagacggagtttggctccaacctgaccggccacggctaccctgacccc
aactacctggacaatgtcttgacggagctgtcggcccagggcgttggagaggacaatctg
aaggactga
DBGET
integrated database retrieval system
