Poeciliopsis prolifica (blackstripe livebearer): 129373058
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Entry
129373058 CDS
T09758
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprl02000
]
129373058 (tmc1)
03037 Cilium and associated proteins [BR:
pprl03037
]
129373058 (tmc1)
Transporters [BR:
pprl02000
]
Other transporters
Pores ion channels [TC:
1
]
129373058 (tmc1)
Cilium and associated proteins [BR:
pprl03037
]
Other cilia and associated proteins
Stereociliary proteins
129373058 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
UPF0542
Motif
Other DBs
NCBI-GeneID:
129373058
NCBI-ProteinID:
XP_054906748
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MPGDTLITSENDTDIDLDFAGDGDFQENHEREKHKGKRRNGDGQKNKRENQRRKRSSKSV
QGIREESQSKTERGERGRRRRGKDEHETSGHEGNEGKRDPTRAKTTKSKKNIKNEKTRKL
EGKEDREGQEKGEKGKLKLVCAKNEEKIESGDQLKEKEKALGMKKKKKSKKVVETSSEPE
TSGEGDDEEEEVNNDGEVRPELLSPEELEKLKEAVEEKKKLIQSLRGKPWPMRQKLVTLR
ESQLFVEKYEGALGKGKGRKLYAYKVMMTKKWMKFQRDFENFKTACIPWEMKIKEIESHF
GSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSIPRKTVPRAEEAGAMDFA
VLWDFGGYAQYSVLFYGYYNNQRAIGWFKFRMPLSYFLVGVGTVAYSYMVVIRTMARNAN
ESGIGDDNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLT
RFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCP
MLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDAINLKRKEEKVVKFNITM
WEASLYNGTGSENSTAPPITIHPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDF
LRAVLVRFLNHCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNLLR
LHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDC
GPFSGKNRMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMVLAIYYLQSTSKSYK
EANVELKKKLQTQNEENKKKNKQAALKAQTDLEEARKSASQAAEHQRDTDASGQRREDDE
EIYNKNQRMYHGRNPSPSVGDREPHFPVRGPGPRNCHNGNQGNSRYLPGFHQQSEPRVYR
VPSLERH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcctggagataccctgatcacctcagagaacgacactgacattgatctggattttgca
ggtgatggagattttcaagaaaatcatgagagggaaaaacacaaagggaagagaagaaat
ggtgacggacaaaaaaacaagagggaaaatcagagaagaaaaagatcttccaagtcggtg
caaggaataagagaggaatctcaatccaagacagagagaggagagaggggtaggaggcga
agaggaaaagatgaacatgaaacaagtggacatgaggggaatgaagggaagcgggatcca
accagggccaagacaacaaaatcaaagaagaacatcaaaaatgagaaaacaagaaagctg
gaggggaaggaggacagagaaggtcaggaaaaaggtgaaaagggaaaactgaaacttgta
tgtgccaaaaatgaggagaaaatagaaagtggagatcaacttaaggagaaagaaaaagca
cttggaatgaagaagaagaaaaagagcaaaaaagttgttgaaacgagttcagagccagag
acgagtggggaaggtgatgatgaggaggaagaggtcaataatgatggagaggtgaggcct
gagttactgtcgccggaggagttggagaagttgaaggaggcagtggaggagaagaagaag
ctgatccaaagtctgagggggaagccctggccaatgagacagaagcttgtcactttacga
gagtctcagctatttgtggagaaatatgagggcgctttggggaaagggaaaggcaggaaa
ctctatgcatacaaggtcatgatgacaaagaagtggatgaagtttcaaagagactttgag
aacttcaaaacagcctgcattccatgggagatgaaaataaaagagattgaaagtcatttt
ggctcctcagttgcctcatacttcatcttcttacggtggatgtacggcatcaacatgatc
ctgtttggtttgaccttcggcctggttatggtaccagaggcattaatggggaggccctac
ggcagcatcccgagaaagactgtccccagagcggaggaagcgggtgccatggactttgct
gtcctttgggactttggaggttacgctcagtattcggtcctcttctacggttactataac
aatcagcgtgctattggctggttcaagtttcgtatgcctttgtcgtacttcctagtcggt
gtgggcacagtggcctacagctatatggttgtcatacggacgatggcgcgtaacgcaaac
gagtcagggattggagatgacaacagcttcaatttcagctggaagatgttcacaagctgg
gactacctgataggaaaccctgagacagcagacaacaagtttgcctccatcaccaccagt
ttcaaggaagcaatcttggaggagcaagagagccgaaaggacgacaacatccatctgact
cgtttcctgcgcgtgttggccaatttcctggtgttgtgctgcttggcaggaagtggatac
ctcatttactttgtggtgcgtaggtctcagaagtttgccctggatggtctggagaatcac
acctggtgggaaagaaatgaggtgaatatggtcatgtcgttactgggaatgttttgcccc
atgctgttcgacgtcatcagcactctggagaactaccacccccgtgtcgccctgcagtgg
cagctgggtcgcatctttgcccttttcctgggaaacctctacaccttcattatcgcgctg
atggatgcgatcaatcttaaaaggaaagaggagaaagtagtaaagtttaacattacaatg
tgggaagcaagtctttataacggcacagggtcagagaacagcactgctccacccatcacc
atccaccctgctgatgtgccaagagggccctgctgggagacgatggtggggcaggagttt
gttcgtctgattatatctgacacaatgacgacttacattacgctgctgattggagatttc
ctgagagctgtgcttgttcgttttctgaaccactgctggtgttgggacctggaggctgga
tttccttcgtactctgagtttgatgtcagtggaaatgtcctggggcttatcttcaaccaa
ggcatgatatggatgggtgccttctatgccccctgtctgccagctctgaacctcctgcgg
ctccatgtgtccatgtacctgcagtgttgggctgtgatgtgctgcaatgttccacaggaa
cgggtctttaaagcctcgggctccaacaacttctacatggccatgttgctggtcatcctc
ttcctgtccactcttccggccatttacaccattgtaaccatccccccttcatttgactgt
ggacctttcagtggcaagaacaggatgtttgatgtgatccaagagacgctggagtccgac
ttcccggcctggttcagtaaagtgttcagctatgcatctaaccctgggctggtgctacct
ttcatattgctcatggtactggccatttattacttacagtccacatccaaaagctacaaa
gaagcaaatgtggaactgaagaagaaactacagacgcaaaatgaagaaaacaagaaaaag
aataaacaagctgcactgaaagctcagacggatctggaggaggccagaaaatcagcatct
caggctgcagagcatcaaagggacaccgatgcttcaggtcaaagacgagaggatgatgaa
gaaatctacaacaaaaatcagaggatgtatcatgggcgcaacccttctccgtctgttggt
gacagagaaccacacttcccagtgagaggccctggtcccagaaattgccataatggcaac
caagggaactcaagatacctgcctggtttccatcagcaaagtgagcccagggtgtacagg
gtgccgagtctggagagacactga
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