Poeciliopsis prolifica (blackstripe livebearer): 129373224
Help
Entry
129373224 CDS
T09758
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
129373224 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
pprl04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
129373224 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
PDZ
LRR_5
LRR_NXF1-5
LRR_EndoS
LRR_Zer-1
LRR_At5g56370
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129373224
NCBI-ProteinID:
XP_054907018
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MDNYSALPLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFQCQALKKLSLPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPSNFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSEMPEVLEQMHSLKELWLDNNSLQSIPGSIG
KLRHLRYLDLAKNRIETLDGDVSGCEALEDLLLSSNMLQQLPDSIGMLKKLTTLKVDDNQ
LTSLPHTIGSLSLLEELDCSCNELESLPPTVGYLHSLRTFAADENFLTQLPREIGNCKNV
TVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKALI
PLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAFDFEDKK
DEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKSMHPGHGHQHQLSSGTATSAG
TNMEHAHLSKEQYEPPWPLPPKELMQVFDSFDGRNENVCQVTDREMQDFSQSQLMDQGSM
HNSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDKKES
TDEEVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPSANTHSHTHTHAHAHPPALPAPSKD
QAPQTHWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWSEAQHYDNT
GFDAEESPMDPTSSNTSQGNPPLGSKPRSQSAHGRRPLLRQDRIVGVPLELDTQTLPYHS
NQRSTPDNDPQSGPSSQNPWQNWTRTPSPLEDRTAFPSKLDLTPTSSPNPDRKDLDSRME
QGSGPLPGSWTYHNSQGEQIRKDQLTVGGGNKVTVVMSKSSDRLSPMMKETRSKFKKSQS
IDEIDIGSYKVYSIPMESYSSSIEQQTSLDRPELPGSMEQTSMSRSQSAPMLDDELGFPG
HGGGNQNQSGQNQKPAIPHKAYHFDQNYNPQVTIDRRIPPPFPNTPDYVNHSSKAMDYLS
QPGKTLPKELVSPRYRAYPPLEMFSFPQAPINQDGPSSQQQQTISTQRSRPGFLRRADSL
VSSTELALFRRVHEAQQEALQEAQYKHQTDPPHYSRALAYSSPMEHSALTNMSDNQNQMM
HNKRNGRYDDDYTTYQEQKKPMIGYPTKSLTQRRPLSARSYSTETYGASQARPVSARPTM
AALLEKMPPDYTLATCPEKPSEDTIKVRPVVPQKPEDITSKMPADWRQQLLRHIEAKRLD
RSGVLKHNTLTLGMLYQGGGHGQGRSTTLNFNLYNNTRHEPPAGRWLPLPPPPSAITTPS
QQAAMLDNDQEGVTGSNQWAPYSLGRRDVPPENLMKKGGHSHNQSHNTMIVTSSSSSSAT
VSHRVVGQQVYDGMMNKGGQYQQGMSLSVVPAGGPGQYQGNVSQGLPSPGQAYPSGGLPM
ALSSSGNQSQYNPHPSHQPATNPQYHVNQGMTHSNQAVMASHTNPRPQSARCLLQTKGQK
STDGFQEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQHDGPAASSLKPGD
KILQVSFCSRSCSTAATRLQRATKRIIFYQKHQKCLVIFLFSKKPNFVDHG
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggataactactccgcgttaccactgcagtgtctggagatgaccaccaaacggaagctg
attggccggctggtgccgtgccgctgtttccgtggtgaagaggaagtgatctcagtgctg
gactactctcactgcagccttcagcaggtcccaaaggaaatattcagcttcgagagaacc
ttggaggaactctacctggacgccaaccagatcgaagaactacccaagcaactcttccag
tgccaggctctgaagaagctaagtttgcccgataacgacctttccaatcttcccaccacc
atcgccagtttggttaacctcaaagagttggacattagtaaaaacggaatccaggagttt
ccagataacataaaatgctgtaaaggcctgtctgtggtagaagccagcgtcaaccccatt
accaaactcccagatggtttcacgcagctcctgaatctgacccagctcttcttgaatgat
gccttcctggagtatctgccctctaactttggcaggctctccaaattacggattctggag
ctgagagagaaccacctgaaaaccatgccaaagtccatccacagactgacacagctggag
aggctggatctggggagcaacgagttctccgaaatgccagaggtgttggaacagatgcac
agccttaaggagctgtggctggataacaactctctacagtctatacctgggtctataggg
aagcttcgccatttgcggtacttggatttggccaagaatcgcattgagacgttggatggt
gacgtctcaggctgtgaggccttagaagatctgctgctgtcctccaacatgctgcagcag
ctgccggactccataggaatgctaaagaagctgaccactctaaaggtagatgacaaccag
ctgacctcactgcctcacaccattgggagcctatctctgttggaagagttggactgcagc
tgtaatgagttggagtcgttgcctcccaccgtcggctacctgcacagcctgagaacgttt
gctgcagatgagaacttcctcacacagctgccgcgggagatcggtaactgcaagaacgtg
acggtgatgtcacttcggtccaacaagctggagtttctgcctgacgaaatcggacagatg
accaaactgcgcgttctcaacctcagcgacaacaggttaaagaatctgccgtttaccttc
accaagctgaaggacctggcagctctgtggctctcagacaatcagtccaaagctttgatc
ccgctgcagacggaagcccatcctgaaaccaaacagaaagttttgaccaactacatgttt
ccacaacagcccaggcatgatgaagattaccagtcggatagcgacagcttcaatcctaca
ctgtgggaagagcaacgacagcagaggatgactgtggcctttgactttgaggacaagaaa
gacgaggaagacaactctgggaaggtcaaggtggagataaacctgaagcgctacccaacg
ccgtaccctgaggatctgaagaacatggtcaaatcagtgcagagccttgtgggtaaaagc
atgcatccaggacatgggcaccagcaccagctgagctcaggcactgccacctcagcagga
accaacatggagcatgcacacctcagcaaagagcagtacgagcctccgtggcccctgccc
ccaaaagagttgatgcaggtctttgattcatttgacggacgaaatgaaaatgtttgccag
gtgacggacagagagatgcaggacttctctcagtctcagctcatggatcaaggatcaatg
cataattctggcatcgacattcccaagaggaaggacaaggaggacttgacagaaagttcg
gaggactcgatgggcggctctcccaatgacatccgcatctccgacatgaggccaacgctg
gtggagccaccgatgtacaaaccaaaggtggtgctgctggggaaggataagaaagagtcg
acagacgaggaggtcgataagctccactgtctgaaccacagcggctcctcggccacctac
tccgactactcaccctcgcagggctcctcgggctcctccaacccgtccgccaacacacac
tcacacacacacactcatgcacacgcacaccctcccgccctgcccgcccccagtaaggac
caggcccctcaaacacactggaccaacagacttgcacagtctttcccaaagcctattgac
tccaagcccctgctgtctcagagagaaacccctccatcgggaacgctgcagcaacgggga
gatcggcgtccactcagcgagccttttgattggtcggaggcccagcactatgacaacacg
ggttttgacgccgaggagtccccgatggacccgacgtcctctaatacaagtcagggtaat
ccgccgctgggctccaaaccccgcagccagtcggctcacggtcgccggcccctcctcagg
caagatcgaatcgtcggagtccccttggagctggacacccagacactcccctaccacagt
aaccagcgctccaccccggataacgacccgcaatctggaccttcctcccaaaacccctgg
cagaattggaccaggacgcccagcccattggaggacaggactgctttcccctcaaagctg
gacctgacgccaacctcaagccccaatcctgaccgcaaggacttggactcaagaatggag
cagggctcaggacctttgcccggatcctggacgtatcacaacagccagggggagcagatc
aggaaggatcagctcaccgttggcgggggaaacaaggtcacagtggtgatgagtaaaagc
tccgaccgactttcccccatgatgaaggagaccagatccaagtttaagaagtcccagagc
attgatgagatcgacattggctcctataaagtctacagcattcctatggaaagctacagt
tcatccatcgagcagcagaccagtttggaccgcccagagctccctggttccatggagcag
accagcatgtcacggtctcagtctgcccccatgttggacgatgagctgggcttcccagga
cacggaggcggcaaccagaaccagtctggacaaaatcaaaaacctgccattcctcacaag
gcctatcattttgaccagaactacaacccccaggtgaccatagatcgcaggatccctcct
ccattccccaacacaccagattatgtaaaccactcctcaaaggccatggattacttgagt
caacctggaaagacgctacccaaggagcttgtgagtcctcggtatcgcgcgtatccaccg
ctggagatgttttcgttcccccaagccccaatcaaccaggacggcccgtccagccagcag
cagcaaaccatctcaactcagcgctccaggccaggctttctgaggcgagccgactctctg
gtgagctccactgagcttgccttgtttcgtagagttcacgaagcccagcaggaggcgcta
caggaagctcaatacaagcatcagacggacccgcctcattacagtcgggctcttgcctac
tcgtcccccatggagcattctgccctcaccaacatgtctgacaaccaaaatcagatgatg
cacaacaagagaaacggtcgctacgacgacgactacaccacttaccaggagcagaagaag
cccatgattggctatccgaccaaaagtctgactcagcgtcgccccctgtctgccaggagc
tacagcaccgaaacgtacggagcatctcaggcccgccccgtgtcggctcgccccaccatg
gccgccctgctggagaagatgccgcccgactacaccctggccacctgccccgagaaaccg
tctgaggacaccatcaaagtgagacccgtcgtcccgcagaaacccgaggacatcacctcc
aagatgcccgccgactggaggcagcagctcctcaggcacatagaggccaaacggttggac
aggagtggtgtcctaaagcacaacacgctcaccctgggcatgctctatcagggcgggggt
cacggccaggggcgcagcaccactttgaactttaacctttacaataacactaggcatgag
ccccctgctggccgctggctgccactacctccgcctccgtctgccatcactacaccttct
cagcaggctgcaatgctggataatgaccaggagggggtgacagggagcaaccagtgggct
ccctactcactcggccgaagagacgttccgcctgagaacctcatgaaaaagggcggacat
tcacacaatcagtcacacaacaccatgatcgtcacctcgtcctcctcatcctcggccacc
gtgtctcaccgcgtcgtcgggcagcaggtttatgacgggatgatgaacaagggcggccag
taccagcaaggaatgtcgctgtcagtggtaccagctggcggcccgggccagtaccaaggc
aacgtctcgcagggccttccctccccaggccaggcgtaccccagtggcggcctccccatg
gcgctgtcgtcgtctggaaaccaatctcagtacaacccccacccctcccatcagccggcc
accaatccgcagtaccacgtgaaccaaggcatgacccacagcaaccaggccgtcatggcg
agccacaccaacccccggcctcagagcgctcgctgcctgctgcagacgaaaggccagaaa
agcacggacggtttccaagagcagctgtgtgtgaggatagagaagaaccccggcctcggc
ttcagtatctctggcggcatcagcggccagggcaaccccttcaaaccctccgacatgggt
atctttgttactagggtacagcatgacggacccgccgcctcctcactgaagcctggagac
aagatactgcaggtttctttttgttcacggagttgctctaccgcggcaacacggctacag
agggcaactaaaaggatcatcttttatcaaaaacaccaaaaatgtttggtaatttttctt
ttctcaaaaaagcctaactttgttgatcatggttga
DBGET
integrated database retrieval system
