Poeciliopsis prolifica (blackstripe livebearer): 129373511
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Entry
129373511 CDS
T09758
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprl03000
]
129373511 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pprl03310
]
129373511 (rorca)
Transcription factors [BR:
pprl03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129373511 (rorca)
Nuclear receptors [BR:
pprl03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
129373511 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
129373511
NCBI-ProteinID:
XP_054907452
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All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECTGVGSHEENGDLAE
HGRTCRRGSSATLSDLDDITTLPEGLLFDLPLTPEDAGGDYCSLEMLGGSAGSSSSSQSS
PEQTSLDFVDSNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIEHIIQSVVKSHVETS
QYSTEELKRMAWNIYNPEETRSYQTKSAEVMWQQCTVHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFASAQLFKALGCDDLVNAVFDLAK
TMSRIQISEDEMALFSAAVLLSPDRPWLTDVQKIHKLQEKVYIGLQSCLQKEGASEEKLA
KMVSKLPMMRSICNLHIDKLEFFRLVHPETAYAFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtcattccctgtaaaatctgtggggataaatcatcaggcatc
cactatggtgttatcacctgtgaaggctgcaagggtttctttcgacgcagccagcaaaac
aatgctatgtactcctgctcaagacagaggaactgcctgattgaccggaccaaccgtaac
cgttgtcagcactgtaggctgcagaagtgtctcgctcttggcatgagccgtgacgcagtg
aaatttggtcgcatgtctaaaaagcagcgtgacagcctgtacgcagaggtccagaagcac
cagcagtcacaggagtgcactggagtcggctcccacgaggagaatggagacctagcagag
cacggacgcacctgcagaaggggctccagcgccacgctcagcgacctggacgacatcaca
accttgccggagggcctgctttttgacctgcccctcaccccagaggatgcaggtggagat
tactgcagcctggaaatgctgggaggaagcgcagggagcagctcgtcctctcagagctct
ccagagcagaccagcttggactttgttgacagcaaccacagcatcaaacacgagtaccag
ctgttgcatgattctggactcttctctcatgccatcctcaaccccctgccagagggatgc
tccctgctggaaatagagcatataatccagagtgtagtgaagtcccatgttgagacaagc
cagtacagcacagaggagctgaagaggatggcatggaacatctataacccagaagagact
cgttcataccagaccaaatcagctgaagtgatgtggcagcagtgcacggttcacatcacc
aacgcaattcagtatgtggtggagtttgccaagcgcatctctggcttcatggacctctgt
caaaatgaccagattattctacttaaagcagggtgcatggatgtccttctgatccgtatg
tgccgagcctacaaccccatcaataatacactgctttttgatggaaagtttgcgagtgct
cagctttttaaagctcttggctgtgatgaccttgtgaatgctgtgtttgacttagcaaaa
actatgagtcgtatacagatatcagaggacgagatggctctgttcagtgctgcggtcctt
ctgtcaccagaccgaccttggctgacagatgtccagaagatccataaactgcaggagaaa
gtttatatcggtctgcagagctgcctgcaaaaagagggtgcatcagaggagaagctagca
aagatggtgtctaagcttcccatgatgaggtccatttgcaacctccacatagataaactg
gagtttttccgactagttcaccctgagacagcatatgccttccctcctttgtacagagaa
gtttttgggagcgaaattacgttcccggactctaccgagggctag
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