Poeciliopsis prolifica (blackstripe livebearer): 129373560
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Entry
129373560 CDS
T09758
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04080
Neuroactive ligand-receptor interaction
pprl04082
Neuroactive ligand signaling
pprl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129373560 (gabra6b)
04082 Neuroactive ligand signaling
129373560 (gabra6b)
04519 Cadherin signaling
129373560 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129373560 (gabra6b)
Ion channels [BR:
pprl04040
]
Ligand-gated channels
GABA-A
129373560 (gabra6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
129373560
NCBI-ProteinID:
XP_054907536
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSIGSLRGMAFVLTSLFLFCASTVCETQHSETSIYLDNITRILDRLLDGYDNRLRPGFGG
PVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWT
PDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLK
FGSYAYPISEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVH
FHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHS
LPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAMKAAAQEAAAAA
AVVPAASTATEGDAASVDANSVLKKRMNSAPVFDRPAKTFPNPPVNAQAFLQQGSAVPAN
NVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRIPGKP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgggtctttgcgaggcatggctttcgttttgacgagcttgttcctgttttgt
gcgagtactgtttgtgagacgcaacacagtgaaaccagtatttatttggataatatcacg
cgtatattggacagattactggatggctatgacaacaggctgcgaccaggatttggaggt
cccgtcacggaggtcaaaactgacatctttgtcaccagctttggtccagtttcagatgta
gagatggagtacaccatggatgtgttctttcgtcagacatggattgatgagcggctcaaa
ttcgaaggcccaattgagatcctgcggctaaacaaccttatggtcagcaaaatctggacc
cccgacacatttttccggaatggcaagaggtcaatctctcacaacatgaccactccaaac
aagctgttccgcatcatgcaaaacggaactatcctctacaccatgagattaactataaat
gcagagtgcccaatgcgcctcatgaacttcccaatggatggccatgcctgcccactcaaa
ttcgggagctatgcataccccatcagtgagattgtgtacacatggaagaaaggaccttta
tcttctgttgaagtcccacaggaatcatccagcttgttgcagtatgacctcattggccag
actgtatcaagcgagaggctgaagtccaacacaggtgaatatgtcataatgactgtccac
ttccatcttcaaaggaaaatgggtttcttcctgattcagacctacattccctgcataatg
actgtcattctggcgcaagtttccttctggattaacaaggaatcagttccagctcggacc
gtctttggtatcaccactgtcctcaccatgacaacattaagcatcagtgcacggcactcc
ctcccaaaagtttcatatgccaccgcaatggattggttcattgccgtgtgctttgccttc
gtcttctctgccctcattgagtttgcggccgtcaactacttttcaacactccaagccaac
cgagagctgcgaaaggcagcagccatgaaggcagctgctcaggaagcagcagcagctgca
gcagtggttccagcagcaagtacagcgacagagggagacgctgcgtcagtggatgccaat
agtgtattgaagaagaggatgaactctgctccagttttcgatcgccctgcaaaaactttt
ccaaaccctcctgtcaatgcccaagctttcctccagcaaggctccgcggttccagccaac
aacgttctgacaggcaccagcatcattgacaaatactcacgcatccttttccctctttcg
tttggcgcctttaacctggtctactggattgtttatctcaccaaggacaccatggagatg
tcaaggattcctggaaaaccttaa
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