Poeciliopsis prolifica (blackstripe livebearer): 129373575
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Entry
129373575 CDS
T09758
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129373575 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129373575 (pds5b)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129373575 (pds5b)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
129373575 (pds5b)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
129373575 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_Vitellogenin
PI-TkoII_IV
INTS7_N
TPR_IPO5
HEAT_EF3_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
129373575
NCBI-ProteinID:
XP_054907557
LinkDB
All DBs
Position
Unknown
AA seq
1409 aa
AA seq
DB search
MAHSKARATDGKVTYPLGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNIVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPFNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNMLRNHVKDLLDLIKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLEDDERIRDQLETLVSPTCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLSCLKMDDEKVAEAALQIFKNTGNKMEESFPHIKSVLLQVLQTKAKR
GPPRQAKYAIHCINAMFTNRDTHFAQIFEPLHKSLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRIPGKKTTKLWVSDDEVSPETMAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFAQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQASSDPKTNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPSRFFTKPDKNFSNTKNYLPPEMKSFFTPGKPKSANVLGAVNKPLSS
AGKQLQSKASRMETTSNNDSSSNPGSPQRGKTRHDSTEMDHSENEDFSLKRSDSVDKDME
KPRARKRGVTSSDDQESKPKRGRKRGSANTTTATESEDQWDEDNRPEDEQNSPPKKGRRG
RPPKSASSNQETPVKGRRGRKKAAPPPEEDDDENEEDEEEEEKVDDEDEDDDDDKSSENM
EVKPKGGRQARAPRRSQGSSELAESMPQKRRGRPPKSAQPAAKKPTRGGRSKAAAAKDES
EDEDEEEEEEEQEDEPAPRGRKKTTGRRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagccacagatgggaaggtcacctaccctctgggggtcaag
gagatttctgacaaaatctccaaagaggaaatggtccgcaggctcaagatggttgtgaag
accttcatggacatggaccaggactctgaggaggaaaaggagctttacctgaacttggcc
cttcacctggcctcagacttctttctcaaacatccagacaaagatgtgcggctgctggtg
gcctgctgcttagcagacatattcaggatttatgctccggaagctccctacacctctcca
gataagctcaaggacatttttatgttcataacacgacagcttaaaggactggaggatacg
aagagcgctcagttcaacagatacttctacttactggagaacatagcttgggtgaagtct
tacaacatttgctttgagcttgaagacagcaatgaaatattcacccagctttacaggacg
ctcttccaggtcataaacaacggccacaaccagaaagtgcacatgcatatggtggatctg
atgagctccattatctgtgagggagacacggtgtcgcaggagctgttggacacggtttta
gtcaacctggtaccggcgcataagaatttgaataaacaggcgtatgacctggccaaagct
ctgctgaaaaggaccgctcaagctattgaaccttacatcactaatttcttcaaccaggtg
ctgatgctgggaaagacgtcagtcagtgatctgtctgaacatgtgtttgatctcatcctg
gaactttacaacatagacagccatctgcttctctctgtgctgcctcagctggaatttaaa
ctcaagagtaatgataacgacgaaaggctgcaggtggtgaagctgcttgcaaagatgttt
ggagctaaagactctgagttggcagcacagaacaaaccgctctggcaatgttacctgggc
aggtttaatgacatccacgtgcctatcaggctagagtgtgtgaagtttgcaagtcactgt
ctcatgaaccatccagacttggccaaagacctaacagaatatctgcgggtcagatcacat
gacccagaggaggccatccgccatgatgtcatcgtctctatagtaactgcagcaaagaaa
gacttgtccctggtcaatgacgcattattaaatattgtaaaggagagaaccttggacaag
agatggcgcgttcgtaaggaagccatgatgggcctcgcatcgatctacagaaaatactcg
ctacaaggagaggggggccgggaggcctccaagcagatatcctggattaaagacaaactg
cttcatatctactaccagaacagcattgatgacagattgctggtggagcgggttttcgcc
cagtatatggttcctttcaacctagaaaccactgaaaggatgaagtgtctctattacctt
tacgctacattggacacaaacgctgtcaaagctttaaatgagatgtggaagtgccagaac
atgttgagaaaccatgtcaaagacctgctggacctgatcaaaaaacccaagtcggaagca
tccagtaaggctgtgtttgccaaagtcatggtgatcacaagaaaccttccggacccggga
aaagctcaggactttgtgaagaagctggctcaggtcctggaggatgacgagcggataagg
gaccagttggagacattggtcagccccacctgctcctgcaagcaggctgaagtctgcgtg
cgagacatcactaaaaagcttggtagccccaagcagcccagtaatccattcctggaaatg
gtcaaattcctgctggagagaattgctcctgtacacatcgacacagagtccatcagcgct
ttaattaaacaggtaaacaaatctattgatgggacagctgatgatgaagaggagggcgtt
ccaactgaagaggcgattagggcaggactggagctgctgaaggtgctgtccttcacacac
ccagtgtcattccactctgcagagacgtttgagtctttgctgagttgtctgaagatggat
gacgaaaaagtggcagaagctgcgctgcagatctttaagaacacaggcaacaaaatggaa
gagagtttccctcacatcaaatctgttttattgcaggtactgcaaaccaaagctaagaga
ggcccccctcgtcaggccaagtatgccatccactgcatcaatgcgatgttcaccaacagg
gacacacactttgcccaaatctttgagcccctacacaaaagtctagaccctgcaaacctg
gagcagctcatcactcctttgaccaccctgggtcacctggcccagttggccccagagcag
tttgctgcgccgctaaaatctctagtcgccaacttcattgtgaaggatctgctcatgaac
gacaggatcccaggcaagaaaacaaccaaactttgggtttctgatgacgaagtgtctcca
gagacgatggctaagatccagggcatcaagctgatggtgagatggttactgggagtgaag
aacaaccaaagcaaatcaggcaattccaccctgaggatgctgactgctatcctgcacagc
gatggtgatctaactgagcagggcaggatgggtaaaccagacatgtcgaggctgcggctg
gcagcagcgtgtgccctgctgaagctggctcaggagccctgctatcatgaaattatcacc
ctggagcagtatcagctgtgtgctctcgtcatcaatgatgagtgctaccaggtgcgacag
tgtttcgcccagaagcttcatcgaggcctctgccgcctccgcctgcctctggagtacatg
gcagtgtttgctctgtgcgccaaggaccccgtaaaggagaggagagctcacgctcgccag
tgcctggtgaaaaatgtcaacataaggcgagagtatctgaagcagcacgcagccatcagc
gacaagttgttgtctcttctaccggagtatgtggttccctacaccatccaccttctggct
cacgacccggattacgttaaagttcaggacattgagcagctgaaagaaattaaagaagct
ttgtggttcgtcctcgagatcatcatggccaagaatgagaacaacagccacgcgttcatc
agaaaaatggtggaaaacatcaagcaaacgaaagatgcccaagcgtctagtgatcccaaa
accaatgagaaactttacacagtgtgtgatgtagccatgaacatcatcatgtcaaagagc
accacctacagtctggagtcccccaaagaccctgtgctgccttcacgcttcttcaccaaa
ccagacaagaattttagcaacactaaaaattaccttcctccagagatgaagtcattcttc
actccaggaaaacccaagtcagcaaacgttttgggcgcggtaaacaagccgctgtcatcg
gcgggtaaacagctccagagcaaagcctctcgtatggaaacaaccagcaacaacgactcg
tcatccaatcctggctccccgcagcgtggcaaaaccagacatgacagcacagaaatggat
catagtgagaacgaggatttcagcctgaagagatcagacagtgttgacaaggacatggaa
aagccccgcgctcgtaaacgtggcgtgacgtccagcgacgaccaggagagcaagccaaag
cgcggacgcaagagggggtctgccaacaccaccaccgctaccgagtctgaggaccagtgg
gacgaggacaaccggccagaggacgaacagaacagcccaccgaaaaaaggacgcaggggc
cgaccaccgaaatctgcctcttccaaccaggaaacacctgtaaaggggaggagggggcga
aaaaaggcagcgcctccgccagaggaagacgatgatgagaacgaggaggatgaggaagaa
gaggagaaggtggatgatgaggatgaagatgatgacgatgacaaaagcagtgaaaacatg
gaggtgaaaccaaagggcggaaggcaagccagggcgccgcggcggtcacaaggcagctca
gagttagcagagtccatgcctcagaagaggagaggacgtccacctaaatcagctcagcca
gcggcaaagaagccgacgcgcggagggcgatcgaaagctgctgctgctaaagatgagtct
gaagatgaagatgaagaggaggaggaggaagagcaggaagatgagccagcaccaaggggt
cgtaagaagacaaccgggcgaagaagatga
DBGET
integrated database retrieval system
