Poeciliopsis prolifica (blackstripe livebearer): 129373590
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Entry
129373590 CDS
T09758
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
pprl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129373590 (rfc3)
03410 Base excision repair
129373590 (rfc3)
03420 Nucleotide excision repair
129373590 (rfc3)
03430 Mismatch repair
129373590 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129373590 (rfc3)
03036 Chromosome and associated proteins [BR:
pprl03036
]
129373590 (rfc3)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129373590 (rfc3)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129373590 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
129373590 (rfc3)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
129373590 (rfc3)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129373590 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
129373590 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
DUF2247
ABC_tran
Rep_fac_C
AAA_5
FAP
Motif
Other DBs
NCBI-GeneID:
129373590
NCBI-ProteinID:
XP_054907575
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDYHKEQAAHLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEQQTIVAPSKKKIEINTISSNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILCSTSTSKVIGPIQSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQISEKSGRNLRRALLMCEACRVQQYPF
SADQDVPEPDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDIIIKGLVEELL
NNCDGQLKTEVAHLAAYYEHRLQLGSKAIYHLEAFIAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggctggataaatatcgaccgacgtcccttgggaaacttgactatcacaaa
gaacaagcggctcatctgaaaaacctggttcagtgcggcgactttcctcacttgttggtg
tacggaccatcaggagcaggaaaaaaaacccgcattatgtgtttgctgagagaactgtat
ggaccaggggtggagaagcttcgcatagagcaacaaactattgtggctccgtcaaaaaag
aaaattgagatcaacacaatatccagcaactatcacttagaggttaacccaagcgatgca
ggaaaccaggatcgtgtggtgatccaggagttgattaaaactgtggcccagtcccagcaa
atccagtccagcactcagagagagttcaaagtggtgctgcttacagaggtggacagactt
actaaagatgctcagcatgccttgcggcgcacaatggagaagtatatggctacctgtcgt
ctcattctctgctcgacatccacgtcaaaggtcattgggccgatccagagccgatgtctg
gctgtcagagttcctctgccgagcacagaagaggtgtgcagtgttctgacgtcggtctgt
aaaaaggaaggtctgctgctgccgcctgagctggccaagcagatcagcgaaaagtcaggt
cgcaacctccgcagagctcttctgatgtgtgaggcgtgcagagtgcaacagtatccattc
tcagcagatcaggatgtgccagagccggactgggaggtctatctgagagaaactgctaat
gccattgtcagccagcagagtcctcaaagattgttggaggttcgagccagattgtatgag
ctgctgacacactgcatccctcctgatatcatcataaagggtttagtggaagaactgctg
aataactgcgatggacagctaaagacagaggtggcccacctggctgcttactatgagcac
cgactccaactgggcagcaaagccatctaccacctggaggcgtttattgcaaagttcatg
gccatgtacaagaagtttatggaagacggcctggacgccatgatgttttaa
DBGET
integrated database retrieval system
