Poeciliopsis prolifica (blackstripe livebearer): 129373593
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Entry
129373593 CDS
T09758
Symbol
frem2a
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129373593 (frem2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pprl04091
]
129373593 (frem2a)
Lectins [BR:
pprl04091
]
C-Type lectins
Lecticans
129373593 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Cadherin_4
DUF3377
Motif
Other DBs
NCBI-GeneID:
129373593
NCBI-ProteinID:
XP_054907579
LinkDB
All DBs
Position
Unknown
AA seq
3120 aa
AA seq
DB search
MLLRGLLLCFSVTGFVLAQPNSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPIND
LVVQTQPGDRCSITVLDNDPLTQRPGHLSPKKFPCDFGPSDVMYSHYGSRSPVRDRVRLQ
LRYDAQTETVIIPFMMEVEVVFTQXELLTKNVPLTVDRLKGISNPIDKKILEFTYDRVNY
KCEVASLSGASALPRYGKLIEGGKLSTVMDCDEFIQAEIRYQHTFNRKTPNRDYVPMVAE
LHDKEGNLVKQEYFHLMVRIRGGEENTPPKPSFVTMMMMEVSQFVMTAFTPDMLAAEDTE
SDPEELIFNISSPLSYEEGYIVSTDDRNLPITSFYQKDLQDLKIAYVPPSLDSDTERIFQ
LEFEVIDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPLISTHNLEISDED
NLDSVTVSVVDGLRHGGLVVLGSQRNIFTPADLTTGAVVYQHDGSDTYSDNIVFKMTDGK
NEVEFLFPITIVPTDDESPIINANMGLVLFKHQTIPISPLVLSAADIDSEDSTIKFTIIP
PFSTIGTVLLRQSDAPEDPSSWKFNAEDEMYEKEVTEWLQKDITDGKLFYRHKGPHSTET
IMDHFMFTVQDDNDPPNLSGDSIFVIRVLPIDDVPPELYPGTTLQMTVEEYELTQFTKEV
LRYTDMDSEDRDLKYALIQAPTDTDENNPVVFGSLVLTDHPDSKVTEFTQAQINHHKISY
APPNVELGITAHVVQFRYTVKDMAGNSVEGVFTIFLQPVNNNPPQITNTGFTVFEGGMHI
ITATELDAQDLDTESEKITCALSRPPKHGQIKAAFTDLEKNRIFKLDDISEGKISYIHNG
EETVSDDFQLDISDGVHVVTVTVKVIVKPFDDETPSNSLSSGTIGSHMDVLENGVAEITA
NVIQGHDDDTDDFQLTFIMEDPPVFGEILVKGLPAARFTQADIINGEVVYAHTGGEIGLF
SQQDGFNLTLTDMSDDWTVGGNVVSGVHVQVTVLPVDNQAPEIGVGLQFSVIEGEKYGIS
SQHLNADDNDTPTDDILCTVIVQPIAGYVENISPAPGSEKSRSGTAISAFTLRDIREGNI
FYVQSIHKGVEPVEDRFTFRCSDGINFSENHFFPIIIIPTNDEKPEIYLREIVVMEGMNI
IIDPPILNGADADFPPEELMFIISKPPKHGAILSQLSTGSVLVSNFTLEEIREASSIIYE
HDDSETTEDSFDIIVTDGKYSVQKTAVIMIIPVDDETPRMAINDGLEVEVGETKEINNKI
LKATDLDSEDGTLTYIIRFGPSQGLLQRKTPYGFVENITLGMNFTQSEIDVGLILYAHNG
QDGFRDLIKFDVTDDINSLIDRYFYITVGSTDIIFPDVISKGVSLREGGRVTLSTDLLST
SDLNSPDEKLVFTVTRAPVRGHLESTDTPGIPIGSFTQLQLAGSKIFYIHTSDDEVKMDS
FEFEVTDGYNPIFRTFRISIVDVDNKKPVVTINNLIVTEGQLKLITPFELTAEDQDTSEK
LIKFTITQLPVHGKVLYNQSTPIASFTKQDLNENLISYKHDGTETLEDSFSFTVTDGTHT
DFYVFPNTIFETRHPQTMKITIMAIDNGVPQIVVNKGAATLKILATGHLGFPISPKVLKV
EDRDSIPASVVFHITTQPQHGDIVNLGHGNNSIDAFSQADIDDLNICYVLRGEENATMDL
FHFSVEDNGGNKLNGQQFRLDWAWISMEKEYYVVDEEDKFLEVVLQRRGYLGETSFIGIG
TQDGSARKDEDFKGKSQRQVQFNPGQTRATWRVQILTDDKYEQAETFQILLSEPVMGVME
FPISATVEILDPDDESTVFFPEPIHSVEEDVGELFIPVHRSGDISEELMVVCSTQQGSAT
GTIPTTVLSYSDYISRPEEHSSILRFDKGEREKMCRVVIIDDSLYEEVESFNVILTLPVG
GRLGMHYPTTKVSILKDIDDAPVFYFGEGQYHVDESDGYVEVKVWRTGTDLSKTGTVTIR
SRKVERFSAEAGIDYVGISHNLDFAPGVSMQTFKVTILDDMGQPELEGAESFELVLRMPV
NGILGEPGKATVFINDSQSDLPKVHFREPVYSGEESDGQITATVYRSGDIWHKSSVRCYS
RQGTAQVASDFEERPNTDASIITFSPGEVEKPCILSLVDDALYEEVEELRLVLGTPRSSS
QFGASVGSLNEALLQIKDTADKPIIRFAETKFNINEPKETGTVVTVKIPVVRVGDTSKVS
VVRVHTKDGSAVSGMDYYPVSQDIKFKQGEKQHXVEVQILPDGVREMREAFTVHLKPDEN
MVAETQVTKAIVYIEESNSIADVTFPSSPHVMSLFHYDDIARTADNFHPPAGYPVICVTA
CNTKYPDYDKTGPICVSEHINNTLTRYRWLIGAPAGPDGITSPMREVDFDMFFTSSKMIT
LDSVYFQAGSRVRCAARAVNSNGEEGLELSSPIVTISQEEGMCQPRKLGTVGAEPFSAKL
RYTGADDPKHPNLIKVTITMPHIDGMLPVISTRPLMNFDLTLSPDGTRVGNHRCSNLLDF
DEVTTGHSFITASTRNPENMGESAPYQFSSSLRGNNTLRFYRNLNLEACLWEFSSYYHMS
ELLTDCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPLGTGGWQHFDLQSELRLTFVY
DTAILWQEGIGSPPQAELQGSLYPTSMRINEQGCMVVNFRTKAHFRGLFVESHSSGRIKT
TATSVSSMVMSVDHPGLTFNLSLVRTEPTYNQPVQQWTFLSDFAIRDYSGTYTVNLIPCT
TSQNMEYTIPPVCNPREYLTFDLDIRFQQVSDPVAVEFSLNTQMFLLAKKSLWLSDGSMG
FEQESDVTFSEGDTIYGRVMVDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGC
LADSPSLLYRFKILDKAQPETQARVFGDVSFNAALAVDDPSAVSLVRKSGSDGFSLDSTA
MFQVAAGREWYIHTIYTVRSKENTNRAIGRRSLEYHSFVSTLTSKGKKSHRRKRSAHDKI
PAIAEDIGIDNSRGTNIMHIALDRTKRRSRGSDELFSGGRELGELNTEDQEESLVSIVGV
LVGLLLTVLIIVTIALVMKSRQKDGKEIWSEGVQEVVKGSVSTEPMLVVRMQDCHNSSEV
NT seq
9363 nt
NT seq
+upstream
nt +downstream
nt
atgctgctccgcggacttctcctgtgcttttcagtaacaggttttgttttagcgcagccc
aacagctccgggttattttacgcgctccggtccgagctgtcggaagacgcaatcctggtg
gccaacaacggaatacgcgtgcctttcggaagatcggtcttcatcgaccccatcaacgac
ctggtggttcagacgcagccgggagaccggtgcagcatcaccgtgctggacaacgacccg
ctcacacagagaccggggcacctctctcccaaaaagtttccatgtgattttggtccgagt
gacgtgatgtattctcactacggctccaggagtccagtcagagacagagtgcggctgcag
ctcaggtatgatgctcaaaccgaaactgttatcatcccgttcatgatggaggtggaagta
gtttttacgcaantggagttactcaccaaaaacgtgccactcactgttgatcgtctgaaa
gggattagtaatcctatcgataagaagatattagagtttacttatgatagagtgaattac
aaatgcgaagtggcatccttatccggcgccagcgcactgcccagatatggaaaactcatt
gagggaggtaaactttccacagtgatggactgtgatgaattcatacaagcggaaatacgc
taccagcacacgtttaatcgtaaaactccaaacagggattatgttcctatggttgcagag
ctccacgataaagaagggaacctggtgaaacaggagtattttcatcttatggttcgcatc
agaggtggagaggagaacactccccccaaacccagctttgtaaccatgatgatgatggag
gtgagccagtttgtgatgacagccttcacccctgacatgctggctgctgaggatacagag
tcagacccagaagagcttatttttaacatcagttctcccttatcttatgaagagggttac
atagtcagcacagatgacagaaaccttccaatcacctccttctaccaaaaagacctgcag
gatttgaaaatagcttatgttccaccttctctggactcggacacagaaagaatttttcag
ctggagtttgaggtgatagacacagagggcgctgtctctgacccatttgcctttatgatt
gttgtgaagccgatgaacactttggcccctgttgtgacgcgtaacacgggtcagctgctg
tatgagggccagtcacggcccctcatcagcacacacaatttggagatcagcgatgaggac
aacttggactctgtcacagtctcagtggtggacggcctacggcatggggggctcgtggtg
ctgggctctcagagaaacattttcacacctgctgacctcacaacaggggctgttgtctat
cagcatgatggcagcgacacatacagtgacaatattgtcttcaagatgacagatgggaaa
aatgaagttgaatttctctttcctatcactattgtccccactgatgatgagtcaccaatc
atcaatgcaaacatgggtttagtgcttttcaaacaccaaacgattcccatatcgcctctc
gtgctcagtgctgctgatattgactctgaagactcaacaattaaatttaccattattccc
cctttttccacaattggaacggtgctcctgcgacagtcagatgccccggaggatccctcc
tcttggaaatttaatgctgaggatgaaatgtatgagaaggaggtgacagaatggcttcag
aaagacatcacagatggaaagttattttacaggcacaaaggtccccatagcacagaaaca
atcatggatcattttatgttcactgttcaggatgacaatgacccacctaatttatctgga
gatagtatatttgtaattcgtgttttaccgattgatgatgtgcccccagagctgtaccct
ggcactaccctgcagatgactgttgaggagtatgaactcactcaattcactaaagaggtc
ctccgctacactgatatggactcagaggatcgtgacctcaaatatgcactcatccaggct
ccaactgatacagatgaaaataaccccgttgtatttggatcattagtgttgacagatcat
cctgactccaaagtgacagagtttacacaagctcaaataaaccatcataagatatcctat
gcgcccccaaatgtggaactgggaattacggcccatgtagtacagttccgttacactgtc
aaagacatggcggggaacagtgtagagggggtgttcacaatctttctgcagccagtcaat
aacaacccaccgcaaatcacaaacacaggttttaccgtgtttgaaggcggaatgcacatt
ataactgctacagagctggatgcccaagaccttgatacagaaagcgaaaagataacttgt
gctctgagtcgaccacctaaacatggccagattaaggctgcattcactgacctggagaaa
aacaggattttcaaacttgatgatatctcagagggaaaaatatcatatattcacaatggg
gaggagacagtgagcgatgatttccagcttgatatcagtgacggggtacatgttgtgact
gtgacagttaaagttattgtaaagccctttgatgatgaaactccctccaacagcctctcc
tcaggaacaatcgggtctcacatggacgtgctggaaaatggtgtggcagaaatcacagca
aatgtgattcagggtcatgatgatgatactgatgatttccagctgacatttattatggaa
gatccccctgtctttggggaaatattagttaaaggattgcctgctgcaaggtttacacaa
gccgacataattaatggagaagttgtgtatgcacacactggtggtgagataggtctcttc
tctcagcaagatggatttaatttgaccctcacagatatgtctgatgattggacagtaggg
ggcaatgtagtcagtggagtccatgtacaagttactgtcctgcctgttgacaatcaggcc
cctgagattggagttgggctccagttcagcgttattgaaggagagaaatatggtattagc
tctcagcacttgaacgctgatgataatgacactccaacagatgacatcctttgcactgtc
attgtgcagcccattgcaggctatgtagaaaatatatccccagctccaggctcagagaag
tcaaggtcaggaacagctatcagtgcatttactctaagagacataagggaaggaaatatc
ttctatgtgcagagtattcataagggggtagaaccagtggaggatcggttcacatttagg
tgctctgatggcatcaatttctcagagaaccatttctttccaatcataatcatcccaaca
aatgatgaaaagccagagatttatttaagggagatagttgtgatggaggggatgaacatt
atcatcgaccctccgattctgaatggcgcagatgctgattttccacctgaggagctgatg
ttcatcatctccaaacctcccaaacatggtgccattttaagtcagctatccacaggctct
gttttggtgtctaacttcaccttagaagagattagagaggcgtcgagtattatttatgag
cacgatgactcagagacaacggaggacagctttgatatcattgtgacagatggaaagtat
tctgtgcagaaaacagccgttattatgatcatccctgttgatgatgagacccccaggatg
gctatcaatgatggcctggaggtggaagttggagagacgaaggagattaataataagatc
ctcaaagcaacagatttagattctgaagacggcacgctaacatatataatccgatttggc
cctagccagggtctcctgcagagaaaaacaccatacgggtttgttgagaacatcacactt
ggcatgaattttacacaatctgaaattgatgtaggactcatattgtatgcacacaatgga
caagatggcttcagagatttaatcaaatttgatgtgactgatgacataaattcactcata
gatcgttacttctatatcactgtgggcagcactgacatcatattcccagatgtgatcagt
aaaggtgtgtctctaagagaaggtggcagggtgaccttgtccacggatcttctaagcacc
tctgatctcaacagtcctgacgagaaattagtttttactgtcacacgggccccagtcagg
gggcaccttgagagcacagacactcctgggatacccattggatcttttacccaacttcag
ttagcaggcagcaagattttttacattcacacctctgatgatgaagtaaaaatggacagt
tttgagtttgaagtcacagatgggtacaatcccattttcagaacatttagaatatctatt
gtggatgtagataacaagaaacccgttgtgactataaataatttaattgtcactgaaggt
caactgaaattaatcacaccctttgagctaactgctgaagatcaggacacttctgagaaa
ttgattaaatttacaataacccagttgcctgttcatggcaaggtgctgtacaatcagtcc
acacctattgccagctttacaaaacaagacctcaacgaaaacctcatcagctacaaacac
gatggaactgaaacactagaagactcattctccttcactgtcactgatggcacacacaca
gacttctatgttttccccaacacaatttttgagacaagacatcctcagactatgaaaatt
accatcatggcaatagacaatggagtccctcagattgtggtaaataaaggtgcagccact
ttgaagattttggccacaggtcatttggggttccccatcagccctaaagtgttaaaagtg
gaggacagggacagcatcccggcgtcagtggtgttccacatcactacccagccccaacac
ggcgacatcgtcaacctgggacacggaaacaactccattgatgcctttagtcaagctgat
attgatgacctgaacatctgctatgtactgaggggtgaagaaaatgctactatggatctc
ttccacttctctgttgaggataacggtggaaacaagcttaatggacagcaattccgcttg
gactgggcctggatttccatggagaaagagtattatgtggtagatgaggaagacaaattc
ttggaggtggtgctccaacgaagaggatatctgggagagacgtcattcattggcattggt
acacaagatggtagtgcaagaaaagacgaggacttcaaggggaagtctcaaaggcaggtc
cagttcaatccaggacagacgagagcgacgtggcgcgttcagattctgactgacgataag
tacgagcaagcggagaccttccagattctgctgtcagaaccagtgatgggagtgatggag
tttcccatctcagcaacagtggagatcctagacccagatgatgagtccaccgtgttcttt
cctgaaccaattcattcagtagaggaagatgttggggagcttttcatccctgtacaccgc
agtggagacataagtgaggaactcatggtggtctgctccacacagcagggttctgccaca
ggaacgatccccaccaccgttctgtcctattcagactacatttcacgtccggaggaacac
agcagcatcctccgattcgacaaaggagagcgggagaagatgtgtcgtgtggtgatcatc
gatgactctctgtacgaggaagtggagagcttcaatgtgattctgaccctgcctgttgga
ggtcggctaggaatgcactatcctaccactaaagtcagcatcctcaaagacatagatgat
gctcctgtgttttactttggagaaggccagtatcatgtggatgaaagtgacggttatgtg
gaggtcaaagtgtggaggacaggaaccgatctgtccaaaacgggaactgtgacaatccgt
tctcggaaggtggagcgtttctctgctgaagctggtattgactatgtgggcataagtcat
aacttggactttgccccaggtgtcagcatgcagacatttaaggtcacaattttggatgat
atgggacagccagagctggagggagccgagagctttgagttagttctgcgaatgccagta
aatggtattctaggcgaacctggcaaagctacagtcttcatcaatgactcacagtctgac
ttgccgaaggtccattttcgtgaaccggtttacagtggagaggagagtgatggtcagata
acagcaacagtgtaccgcagtggtgacatctggcacaaatcctctgttcgctgttactcc
cgtcagggcaccgcacaagttgcctctgacttcgaggagcgtcccaacacagatgcttct
atcatcactttttcacccggtgaggtggagaagccgtgtatcctgtcactggttgatgat
gcattgtacgaggaggttgaagaactaaggctggtcttggggacaccaaggagcagctca
cagtttggcgcatcagttggatctcttaatgaggctctacttcaaataaaggacacagct
gacaaaccaatcattcggtttgcagaaactaagttcaacattaatgaaccgaaggaaact
gggactgtggtaactgtgaagatccctgtggtacgagttggcgacacatcaaaagtgtca
gtggttcgggttcataccaaagatgggtcagccgtctcaggaatggattattacccagtg
tctcaagatatcaagtttaaacagggagagaaacaacatngtgtagaggtgcagatattg
cctgatggagtcagagaaatgagggaggcttttacagtccatctgaagcctgatgaaaac
atggtggctgaaactcaggtgacgaaagctatagtttacattgaagagtccaacagcata
gctgatgtcaccttcccctcctcaccccatgtcatgtcactgtttcattacgatgacatc
gccaggacagcagataacttccacccaccagctggctacccagtcatctgtgtcacagct
tgcaacacgaaatatccagactatgataagacgggtcctatctgtgtcagcgagcacatc
aacaacaccttgacccgctaccgctggcttatcggtgccccagcaggtcccgatggcatc
accagccccatgagggaggtggactttgacatgttctttacctcctccaagatgatcacg
ctggactcggtctacttccaggcaggttcaagggtgcggtgtgctgctcgagctgttaac
tctaatggggaggaaggtttggagctcagcagccccattgtcaccatcagccaggaggaa
ggtatgtgtcagcctcgtaagctgggaactgtgggcgctgaacctttctctgcaaagctg
cgctacactggagcagatgacccaaaacaccctaacctgatcaaagtgaccatcaccatg
cctcacatagatggtatgcttccagtaatctccactcggcccctcatgaactttgacctg
actttgagtccagatggaactcgagtcggaaaccaccgctgttcaaatttgcttgacttc
gatgaggtcaccacaggtcacagcttcatcactgcttcgacacgcaacccagagaacatg
ggggagtctgcgccctaccagttcagcagctctctgcgggggaacaacacgctgcgcttc
tataggaacctgaacctggaagcatgtctgtgggagttcagcagctactaccacatgtct
gagctgcttacagactgtggaggtacaataggcacagatggacaggtgctgaacttggtc
caatcttatgtaaccctgcgtgtgcctctctacgtgtcttatgtgttccactcgcccctg
ggcaccggtggctggcagcactttgacctccagtcagagctgcgtctcacttttgtgtat
gacacagcaattctgtggcaggagggcatcggcagcccaccacaggcagagctccaggga
tcgttgtatcctaccagcatgcgcatcaatgagcagggatgtatggtggtgaatttccgc
accaaagctcatttcaggggtctgtttgttgagtctcattcttcaggcagaatcaaaaca
actgcaacatccgtatcatcgatggtgatgagtgtggaccaccctggcctgacctttaac
ctcagcttagtgaggactgaacctacctacaaccagccagtccagcaatggaccttcctc
tctgattttgctatcagagattattctggaacatacacagtgaatttgatcccatgtaca
acatctcagaacatggaatacactattccacctgtttgcaatcccagagaatatctcact
tttgatctcgacattagatttcagcaagtgagcgacccagttgcagtggaatttagtctg
aatactcagatgttcttgctggccaagaagagcctctggctttctgatggctctatgggt
tttgaacaagagagtgatgtcactttttctgaaggtgacacaatatatggtcgtgtcatg
gtggatccagtgcagaatttgggagattctttcttctgcagcatagagaaggtgtttctc
tgcactggtgctgatggctacgtgcccaaatataacccaactaagtttgaatttggctgt
cttgctgactctccatccttgttatacagattcaagattcttgacaaggctcaaccagag
actcaggcacgtgtgtttggagatgtcagttttaatgcggcgctggcagtagacgatcca
tccgctgtgtctcttgtcagaaagtcaggatctgatgggtttagcctggactcaacagcc
atgttccaggttgctgcagggcgtgaatggtatatacacactatttacacggttcgctcc
aaagagaacaccaacagggccattggaagacgcagcctagagtaccactcttttgtttcc
actctgacatcgaaaggcaaaaaaagccatcgcagaaaaagatctgctcacgacaaaatc
ccagcaattgcagaagatattggaatagataacagccgagggaccaacattatgcatatt
gctttagaccgcaccaagaggaggtcgaggggatcagatgagttgttctctggtggcaga
gaacttggtgagctgaacactgaggatcaagaggaaagtcttgtgagcattgtgggggta
ctggtggggctgctgctgacagtcctcattattgttaccattgcactggtaatgaaatcc
agacaaaaggatggaaaggagatatggagcgagggagtgcaggaagtggtgaaaggttct
gtcagcactgaacccatgctggtggtgaggatgcaagactgccacaacagctctgaggtc
tga
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integrated database retrieval system
