KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129373754
Entry
129373754         CDS       T09758                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pprl03009]
    129373754 (wdr18)
Ribosome biogenesis [BR:pprl03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    129373754 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_alt WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_EML WDR55 WD40_MABP1-WDR62_1st Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_WDR75_2nd WDR54 Beta-prop_Vps41 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 129373754
NCBI-ProteinID: XP_054907808
LinkDB
Position
Unknown
AA seq 430 aa
MAAPLEVIISSDSGSQLWNCTVFDLHSGSSLLSYRGGNSAARSLAVLRGEFLLSAQLGKN
FINVWEIQRKDQLQQKIVCPGVVNCLAASPDGAFLAAGVAEAVYLWEVCTGKLLAVLSRH
YQDVTCLKFTDDSSHFVSAGKDNLALVWNVCSVVQMDLSHAPEPRHVLSRHSLPITDLHC
GHMGAQARVATSSLDQTAKVWELSSGELLLSVLFDVEIMSVTFDPSEYFLFCGGCDGNIF
QVSLCSQSLNREKSFQSDSEGNQVFKGHRSLVTCLSVSMDGTLLLSGSQDETACLWDVQS
RQSVRCLTHKGPVTNAVIMAVSANMFLPDSRPTVPLPRFGRHLQAPEGPDAEGGGAWVRP
ALNAQEEQDSFLQKADSLYSLMLAVNDKAFCGDGENSALRVAELEEEVQTLKKVNKDLFE
FSSQLLTKPT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atggcggctcctctggaggtgataatcagcagcgattcgggctcccagctctggaactgc
accgtgttcgacctccacagcggctccagcctgctgtcctaccggggaggcaactctgcg
gcccggagcctcgccgtcctgcggggagagtttctgctcagcgcgcagctggggaagaac
ttcatcaacgtgtgggagatccagaggaaggaccagctgcagcagaagatcgtctgtcca
ggtgtggtcaactgtctcgccgcctcacctgacggggctttcctcgctgcaggagtcgcc
gaggcggtttacctgtgggaggtgtgcacaggtaagttgctggcggtgctcagtcgacac
tatcaagacgtcacgtgtctgaagttcaccgacgacagcagccattttgtttctgcgggc
aaagacaacctagcgctggtgtggaacgtgtgcagtgtggtccagatggatttaagccac
gcccccgaaccacgccacgtcctgtcccgtcattctctgccaatcacagacctgcactgc
ggtcacatgggagctcaggccagagtcgccacatcatcgctggaccagaccgcaaaggtg
tgggagctctcctcgggtgagctgctgctgtccgtcctctttgacgtggagatcatgtcg
gtaacctttgacccctcagagtacttcctgttctgtggaggatgtgacgggaacattttt
caggtgtctctctgcagccagagtctgaaccgggaaaagtcgttccagtcggacagcgag
ggaaaccaggtgttcaagggccacaggagccttgtcacctgcctctccgtgtccatggac
gggacgctgctgctgtccgggtcgcaggacgagacggcctgcctctgggacgtccagagc
cggcagagcgtccgctgcctgacacacaaaggtcctgtgaccaacgccgtcatcatggcc
gtctcggctaacatgttcctgccggacagtcggcccaccgtcccgctgccgcgcttcggc
cgacacctgcaggcccctgagggccccgacgccgaggggggtggggcctgggtgcgcccc
gccctcaatgcacaggaggagcaggactcgttcctgcagaaggccgacagcttgtactcc
ctgatgctcgccgtgaacgacaaggcgttctgcggtgacggtgagaactcggcgctgcga
gtcgctgagctggaggaggaagtccagacactaaagaaggtcaacaaagatctgtttgag
ttttcatctcagctgctcaccaagcccacatga

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