Poeciliopsis prolifica (blackstripe livebearer): 129373873
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Entry
129373873 CDS
T09758
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
129373873 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pprl04054
]
129373873 (dhx58)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129373873 (dhx58)
Pattern recognition receptors [BR:
pprl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
129373873 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
BTRD1
Feld-I_B
AAA_22
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
129373873
NCBI-ProteinID:
XP_054907952
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MAEFELRSYQKEVVERALKGENVIIWLPTGGGKTRAAVYVARKHLETTANAKVMVLVNKV
HLVDQHYTKEFNPYLGNGYRLMKVSGDSQEKDFFGIVVQDNDVIICTAQILYNALINKEE
AKHVELSDITLLIIDECHHTHKESVYNKIMRCYVEKKLKGQRQIPQILGLTASPGTGGAK
DLEDAVDHVLEICANLDSAIVSTKNYTPELEEKVPRPQKTFDIVEKRASDPFGDHIKWMM
QQIHEFMNLPSDVRLRECGTQEYEADVMILEQRGVREDNRLLAQCALHLKQYNDALLIND
TLRMMDAYCSLEEFYNTKFNTAIDGTDYFLVGLFQENQVELKKFATDPRYENPKMAKLES
TLLGQFGPDVQSRGILFSRTRRSTHCLLDWVRKKRTLQNAGIKAAILTGAGNGITYMTQN
EQADTIRNFRNGALNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARARDSQ
YSVVAQKDGREIRRERINEYLEELTGKAIARVQSMNEHAFRRKINEIQTEAVIKNKVLQD
RKTEKNNRYAASRIRFLCRNCFAQVASGSDFKLLENAHFVNVNPDFKNHYKRGGKVVLEK
RFEDWEPGCTVSCNNGNCNKDWGFEMKYKEVAILPNVAIKNFALETPDGRVTVKKWKDVP
FMVEEFSFEQYCNDNFPDLFD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtttgaactacgttcctaccagaaggaagtggttgaaagggcactgaaggga
gaaaatgttatcatttggcttccaactggaggtggaaagacccgagctgctgtgtatgta
gccaggaagcatttggagaccacagcaaatgctaaagtgatggtgctggtcaacaaggtt
catcttgtggaccaacattacaccaaagagtttaatccttacctgggaaatggttataga
ctcatgaaagtcagtggtgacagccaggagaaggatttcttcgggatcgtggtgcaggac
aatgacgtgatcatctgcacagcccagatcctgtacaatgctctgatcaacaaggaggaa
gcgaaacatgtagagctctcagatatcactctactgataatcgacgaatgccatcacacc
cacaaggagtcagtctacaacaaaataatgagatgctacgtggagaaaaagctgaaagga
caacgacagattccacagatcctgggtctcactgcatcacctggaacaggaggtgcaaag
gacctggaagatgctgtggatcatgtgctggagatctgtgccaacttagactcagctatt
gtctcaactaaaaactacacacctgagctggaggagaaggtgcctcggcctcaaaagacc
tttgacattgtggagaagagagcatcagacccatttggagaccatatcaagtggatgatg
cagcagatccatgaattcatgaaccttccttctgacgtgaggcttagagaatgtggcaca
caagaatatgaggcagatgttatgattctggagcaacgaggagttagagaggacaacaga
ctcttggcacaatgtgcactccatcttaaacagtataatgacgctctactcattaatgac
acactgcgaatgatggatgcatattgctctttggaggaattctacaacacaaaattcaat
acggccattgatggaacagattacttcctggtgggactttttcaagagaatcaggtagag
ctgaagaagtttgctacagacccccgctatgagaacccaaaaatggcaaaacttgagagc
actctccttggccagttcggtccagatgtccagtctaggggcattctgttttccagaact
cgcaggagcacccactgcctcctcgactgggtgcggaaaaaaagaacattgcagaatgca
gggataaaggctgccatccttacaggagctggtaatggcatcacttatatgacacagaat
gagcaggcagacacaatccgcaacttccgaaatggtgcactgaacctcctgatctccacc
agtgtggctgaggaaggcctcgacatccctgaatgcaacctagtggtacgatatggactc
cttacgaatgagattgcacagcagcaggccagtggacgtgcccgagcaagggacagccag
tattcagtggtggcccaaaaagacggacgggagatccgcagagagcgcatcaacgaatac
ttggaagagctgactggaaaagccattgctagggttcagagtatgaatgagcatgcattc
cgcagaaagatcaatgaaattcaaacagaggccgttattaagaataaagttttacaagat
cgtaaaacggagaagaacaaccgatatgctgcttctcgcatcaggttcttgtgccgaaac
tgttttgcacaagtggcatctgggagtgactttaaacttcttgaaaatgcgcactttgtc
aacgtaaatcctgactttaaaaatcactacaaacggggtggaaaggtggtgctcgagaaa
cgttttgaggactgggagcctggatgcaccgtcagctgtaataatggcaattgtaacaag
gattggggatttgaaatgaaatacaaggaggtagccatacttccaaatgtcgccatcaag
aactttgccttggagacacctgacggacgggtcacagttaaaaagtggaaggatgttcct
tttatggttgaggagttttcatttgaacagtattgcaatgacaacttcccagacttgttt
gattaa
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