KEGG   Poeciliopsis prolifica (blackstripe livebearer): 129373875
Entry
129373875         CDS       T09758                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
pprl  Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04137  Mitophagy - animal
pprl04144  Endocytosis
pprl04145  Phagosome
pprl04148  Efferocytosis
pprl05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pprl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129373875 (rab5c)
   04145 Phagosome
    129373875 (rab5c)
   04137 Mitophagy - animal
    129373875 (rab5c)
   04148 Efferocytosis
    129373875 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129373875 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pprl04131]
    129373875 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprl04147]
    129373875 (rab5c)
   04031 GTP-binding proteins [BR:pprl04031]
    129373875 (rab5c)
Membrane trafficking [BR:pprl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    129373875 (rab5c)
 Endosome - Lysosome transport
    129373875 (rab5c)
Exosome [BR:pprl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129373875 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   129373875 (rab5c)
  Exosomal proteins of colorectal cancer cells
   129373875 (rab5c)
  Exosomal proteins of bladder cancer cells
   129373875 (rab5c)
GTP-binding proteins [BR:pprl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    129373875 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta SDR-like BrnT_toxin B12-binding
Other DBs
NCBI-GeneID: 129373875
NCBI-ProteinID: XP_054907955
LinkDB
Position
Unknown
AA seq 220 aa
MAGRGGPARTNGTAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQGGAGPGGRARGGVDLQETAPQGRSGQCCGGGN
NT seq 663 nt   +upstreamnt  +downstreamnt
atggcagggcgaggtggaccagcgcggaccaacggcactgctgctagcaacaagatctgt
cagttcaaactagtgctgctgggagaatctgcagtcggaaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcatgagtatcaagagagcaccattggagctgccttcctcaca
cagacggtatgtttggatgatacaacagtcaagtttgagatctgggacactgcaggacag
gaacggtatcacagcttggcacctatgtactacagaggagcccaggctgccattgtggtc
tttgacattaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctgcag
cgacaagccagccccaacattgttattgcactggcaggaaacaaagccgacctggccaac
aagagagccgtagatttccaggaagcacaagcatatgcagacgacaacagtttgctcttc
atggaaacttcagccaagaccgcaatgaatgttaatgagatttttatggctatagccaag
aaacttccgaagaacgagcctcaaggcggagcgggaccaggcggacgggccagaggtggc
gtggacctgcaggaaactgctccacagggcagaagcggccagtgctgtgggggtggaaac
taa

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