Poeciliopsis prolifica (blackstripe livebearer): 129374034
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Entry
129374034 CDS
T09758
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129374034 (casc3)
03015 mRNA surveillance pathway
129374034 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374034 (casc3)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129374034 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129374034
NCBI-ProteinID:
XP_054908201
LinkDB
All DBs
Position
Unknown
AA seq
766 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGKSGSPATKARGREPDPVEAPVSRSEAKSDVES
ECESEDGAGEAVLSDYDSADPEENASRSEGGEEEEEGFSEEEAPAAAGEPKPAAADGPTQ
NDAEEEEKEEEEEEAGGSSKEESKTEEKGNLAGERQSGDGQESTDDPETKTGGKPGQQLD
DDEDRKNPAYIPRKGLFFEHDVRGQTQEEERPKGRNRKLWKDEGRWEHDKFREEEQAPKS
REELIAIYGYDIRNGGGGPGDRAYRQRRPRQSSPPDREKRWRDGQRPARTWQNRGGGPLP
PSSVPPPSSSSAFPPLSAAQRSNNSSRPPPSRSRPPHYSQVHQLSQSEYRNNESNAPQVH
PRERHAPKTQLDPSGDRGGAGRGGRGHGGRGGSFVVIEEVSDSQSGAAEEDPRSESAATS
AATAAAGQPGGYQSPRRQQQERRGSGDRAASGLAASTSDPTLQSSAANREASPPAERPVE
RKSYSLARRTRSRPSDLGSKQASVEESAAGGNSSSPSGAGGKGWTGGTDGGSQTAGGGGV
AELDQEVARLNLVRQTWSQSPTSYVRSEMRGLPNPIHMPSGPPQYSNMEEMGVGSNRAKR
YSSQRQRAVPEPTPPMHLGVMEPGHYYEPMSYQGPIYTHGEGPAPIPPQSMLVQPEMHIP
HPGLHPHQSGAPIANPTIYGGPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPAMYPNPQGQ
AQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEVPYASE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggaggaggaggcgcgcgtctcaggacagcgaggacgacgacgag
tccggctcgggttcggacagcgggaagtccggttctccagcgacaaaggcccgaggccga
gaacccgatccggttgaggcgccagtgagccggtccgaggcaaaaagcgacgttgagtcc
gagtgtgagagtgaagacggagcaggagaagccgtcctctcggattacgacagcgccgat
ccggaggagaacgcgtcccgctcagagggaggagaggaggaagaggagggcttcagcgag
gaagaggctcctgcagcagccggcgaacccaaacccgctgctgctgacggtcccacacag
aatgatgcagaggaagaggagaaggaggaagaggaggaggaagcaggagggtccagtaag
gaggagagcaagacggaggagaagggaaacctggcaggagagaggcagagcggagatgga
caggagtccaccgacgacccagagacgaagactggagggaagcctggtcagcagctggac
gatgacgaggaccggaagaacccggcttacattcccaggaagggtttgttcttcgagcac
gacgtccgcggacagactcaggaggaggagaggccaaaaggtcggaacaggaagctgtgg
aaggacgagggccgctgggagcacgacaagttcagggaggaggagcaggcgcccaagagc
cgcgaggagctcatcgccatctacggctacgacatccggaacggcggcggcggccctgga
gaccgggcgtacaggcagcgccgacccaggcagagttctcctcccgacagagagaagcgg
tggagagacgggcagagaccggcccggacctggcagaaccgaggaggaggaccgcttcca
ccttcatctgtccctccaccctcctcttcctcggcgtttcctcccctctctgctgctcag
cggagcaacaactcctccaggccgccgccctcccgcagcagaccgcctcactacagccaa
gtgcaccagttgtctcagtcagagtacaggaacaatgaatccaacgcacctcaggttcat
cccagagagcggcacgccccaaaaactcaactggacccatccggagacagaggcggggca
ggtagaggtggacggggccacggaggaagaggaggctcctttgtggtcattgaggaggtt
tcagacagccaatcaggcgcagcggaggaggatccgaggtcagagtctgcagcaacgtct
gcagcaacggctgcagcagggcagccgggcgggtatcagtcaccgagacgacagcagcag
gaacgaagaggcagcggggacagagctgcctccggattggctgcctccacctctgacccc
accctccagtcttcagcagccaatcgggaagcctctccgccagctgagcgccccgttgaa
cgtaaatcgtactctctggcccgcaggactcgctcgcggccgtctgacctcggcagcaag
caggcctcagtggaggagtcagcagcggggggaaacagctcctcacccagcggtgccggg
ggcaagggctggacggggggcactgatgggggcagtcagacagcgggtgggggaggggtc
gccgaactggaccaggaagtggcccggctcaatctggtccgacagacctggagtcagagt
ccaacgtcgtacgtacgctccgagatgagaggtcttcctaaccccatccacatgcccagt
gggccgcctcagtactccaacatggaggagatgggtgtgggctccaaccgggccaagcgt
tactcctcccagcgtcagagagccgttccagaaccgaccccgcccatgcacctgggagtg
atggagcctggacactactacgagcccatgtcgtaccaaggaccaatctacacccacgga
gaaggccccgcccccatcccgccccagagcatgctggtccagccagagatgcacatccct
catcctggtctccatccccaccaatcaggagcccccatcgctaaccccaccatctacgga
ggcccacctgtttccctgtcaccggggcaaccacagcagctgctgcctcctccgttctac
cctcctcctggggtcatgaccttcccctacccggccatgtatccaaacccacagggtcag
gcccaggtgacgtacggcggcgtcacgtactacgacaccatgcagcagcaggcccagccc
aaaccgtcgcccccccgccgcacctctcagcccgtcaccgtcaaacccccccctccagag
gttccctatgcctcagagtga
DBGET
integrated database retrieval system
