Poeciliopsis prolifica (blackstripe livebearer): 129374105
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Entry
129374105 CDS
T09758
Symbol
tnpo1
Name
(RefSeq) transportin-1 isoform X1
KO
K18752
transportin-1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129374105 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374105 (tnpo1)
03009 Ribosome biogenesis [BR:
pprl03009
]
129374105 (tnpo1)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129374105 (tnpo1)
Ribosome biogenesis [BR:
pprl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
129374105 (tnpo1)
Pre-60S particles
129374105 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
IBN_N
Cnd1
Vac14_Fab1_bd
TOR1L1_N
HEAT_EF3_N
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
Dopey_N
TPR_TTI1_C
DUF3689
Motif
Other DBs
NCBI-GeneID:
129374105
NCBI-ProteinID:
XP_054908276
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKNECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSGDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNVMIPKFL
QFFKHNSPKIRSHAIACVNQFIIGRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLLRTQDPDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
IPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEEDDDD
DDEMDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPDWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDVYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNRLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGELIVRFYLETCFQNGDVIFCVYEMRLAGPEMQPYIAVVLH
QLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDS
AFRGICTMISVNPGGVVQDFIFFCDAVASWVNPKDDLREMFYKILHGFKNQVGEENWRRF
SDQFPLPLKERLATFYGV
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaggggcttcagcaaatactccagctactgaag
gagtctcagtcaccagacacgtccacgcagagatccgtccagcaaagactcgagcagctg
aaccagtacccggactttaacaactatttgatatttgttttgaccaaattaaaatccgaa
gacgaaccgacccgttccctgagcgggctgattctgaagaacaacgtaaaggctcactac
cagaacttcccaaacggagtgtctgattttatcaaaaacgaatgcctccaaaatatcgga
gactcctctcccctcattcgggccacagtgggaatcctcatcaccaccattgcctccaaa
ggagagctgcaaaactggcctgagcttctgcccaaactctgtctgctgctggattctgga
gactacaacacatgtgagggagcgttcggggctctgcagaagatctgtgaggattctgcc
gagatcctggatagcgacatgctggatcgccctctaaacgtcatgattcccaaattcttg
cagttcttcaagcacaacagcccgaaaattaggtctcatgccatcgcctgtgtcaatcag
ttcatcatcggcaggacccaggccctaatgcttcacattgacccgttcatcgagaacctg
tttgcactggcgactgatgaggagcccgaagtgaggaagaatgtttgcagagccctcgtc
atgctgctggaggttcgcctggatcgtcttctgcctcacatgcacaacatcatagagtac
atgctcctgaggacccaggacccagacgagaatgtcgccttggaggcctgtgagttctgg
cttacgctggctgagcagccggtgtgtaaagaagtgctgtgcggtcacctctctcagctg
attcctgtacttgtcaacgggatgaagtactctgagattgacatcattttgctcaagggg
gacatcgaggaagacgaggccattccagacaacgagcaggacatcagaccacgcttccac
cgctcccgcacggtcgcccagcagcacgagggcgacgggattgaggaagacgacgacgac
gacgatgaaatggacgacgacgatacaatttctgattggaacctgcgaaagtgctctgct
gcagcgctggacgtgttggccaatgtgttcagggacgatctgctgctgcacatcctccca
ctgctcaaagagctgcttttccaccctgattgggttgtgaaggagtccggcatcctggtg
ctgggggctatagctgaaggctgcatgcaaggcatgatcccctacctgcctgagctcatc
ccacacctcatccagtgcttgtctgacaaaaaggcactggtgcggtccatcacctgctgg
acactgagtcgctacgcacactgggtggtcagccagcccccggatgtttacctgaagcct
ctaatgactgagctattgaagcgcatactggatagcaacaaacgtgtgcaggaggctgct
tgcagtgcctttgccactttggaggaggaggcttgcacagagctggtaccctacctggcg
ttcatcttggacacgctggtatttgctttcagcaagtaccagcacaaaaatctgctcatt
ctctacgacgccatcgggacgctcgcagattctgtgggacaccacctaaataaaccggaa
tacatccagatgctgatgccaccactgatacagaaatggaaccggctgaaagatgaagac
aaagatctttttcctttgttagaatgtttatcctcagtagccacagcccttcaaagcggc
ttcctgccctattgcgagcctgtttaccagcggtgcgtcaatctggtccagaagacgctc
gctcaggctatgcttcatcagtcacaacctgaccagtatgaggcgccggacaaagacttc
atgattgtggctctggatctactgagcggactggccgagggcctgggtggcaccatcgag
cagctggtcgctcgtagcaacatcctcacgcttatgtatcagtgcatgcaggacaaaatg
cctgaggtgcgtcagagctctttcgctctgcttggggatctcaccaaagcttgcttccag
catgtgaaaccctgcatcgctgattttatgcccatactgggtacaaatttgaacccagag
ttaatatctgtgtgcaacaatgcaacctgggcaatcggagagatatctatacaaatgggt
gagttgatagtccgtttttacctcgaaacctgctttcaaaacggtgacgttattttctgt
gtttatgaaatgcgactcgcagggcctgaaatgcagccttacattgccgtggtgctgcac
cagctggtggagatcattaacagacccaatactccaaagactctcctggaaaacacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcacccatgctacagcag
tttataagaccctggtgcacctctctgcgaaatataagagacaatgaggagaaagactcg
gcattcagaggaatttgcaccatgatcagtgtaaatcctggaggcgtggtgcaggacttt
atcttcttctgcgacgcagtggcctcctgggtaaatccaaaggacgatctcagagaaatg
ttctacaagatcctccacgggttcaagaaccaggtgggcgaagagaactggaggcgcttc
tctgatcagttcccgcttcccttgaaggaacgactggcaaccttttatggggtgtaa
DBGET
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