Poeciliopsis prolifica (blackstripe livebearer): 129374120
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Entry
129374120 CDS
T09758
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374120
03041 Spliceosome [BR:
pprl03041
]
129374120
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
129374120
Spliceosome [BR:
pprl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129374120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129374120
NCBI-ProteinID:
XP_054908319
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETASTKQLSFDEVLNQSSLSNCTVYCGGVTQGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNIVKCYWGKETTDIVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQAWDQQGYNHLHAGAGWTGVGAVSNGGM
VEPGQGVNGTMLTNQAGMSTTGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagccgaaaaccctgtatgtggggaatctgtcccgggacgttacggag
gccctcatcttggaattgttcagccagatcgggccttgtaaaagctgcaaaatgatagta
gatacagcaggtcacgatccatactgctttgtggagttctatgagcatagacacgccact
gctacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtgaaggtcaactgg
gccacgaccccaacgagccagaagaaagacacgagcagtcacttccatgtttttgttgga
gaccttagtccagaaatcaccacagatgacataaaagcagcttttgctccttttggaaaa
atatcggactgtcgcgttgtgaaagacatggccacaggtaaatctaaaggctatggtttt
gtctccttcttcaacaaatgggatgcagagaacgccatccagcaaatggggggtcagtgg
ctaggagggcggcagataaggaccaactgggccacgaggaagcctgctcctaaaacgaca
aatgaaacagccagtaccaaacagctctctttcgatgaggtgttaaaccagtccagcctc
agtaactgcacagtctactgtggaggagtcacacaaggtctcacagagcaaataatgaga
cagaccttctcaccttttggccaaataatggagatccgcgttttcccagaaaaaggctac
tcctttgtgaggtttaactcccacgaggccgcagctcatgccatagtttctgtaaatggc
acctcaatagagggcaacattgtaaagtgctactgggggaaagaaacaacagacattgta
cagggccccatacagcaggtacagatggcacagcagaacacgctgagctttgcagcccag
ccctacaaccagtggggccagtggtacagcaacacgcaacagatcggtcagtacgtgccc
aacggatggcaggtgccgagctatggcgtctacggacaggcctgggatcagcagggctac
aatcatttacatgctggcgctggatggacgggcgtgggcgccgtgagcaacgggggcatg
gtggagcccgggcagggagtcaacggaacaatgctaaccaaccaggcaggcatgagcacc
actggataccccacccactga
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