Poeciliopsis prolifica (blackstripe livebearer): 129374321
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Entry
129374321 CDS
T09758
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129374321 (fbxo18)
Enzymes [BR:
pprl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129374321 (fbxo18)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129374321 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
F-box
Viral_helicase1
F-box-like
AAA_30
PhoH
AAA_22
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
129374321
NCBI-ProteinID:
XP_054908665
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MEVAVKGRAKRKHLNAQECDELGRSEDGTDALTRRNATQGRRDPNWGLYPRTPTKQRRKG
PFVLGSPSGKQKPIHDFFSVTKVISSSPHKSSSMPSTSMHRPGSGVVFEEDEEDDDVSLL
ATPTAAEIDAEDEIDDDSLLAAEMLPEKVSSTEARLLEADYLEGMTAEMFGDDEGFDDFE
EEEEEEEEGEVEPLPDAHFGLLGSDKALLRPQGCVEDLPEEVLREVLCLVPAADLYRNVC
LVCHRWRNIVLDPKFVPFKKQYFRYMMREKETVLEVGCILKNSNITSPAPPEHSIRNLVV
LMAQHKVGERVKPDDVLSCVNKHRLFPQAEAAVRLRIPDIQKFLHLGIEGPNPYAVMAVI
LVLSESVGDVQALVSLLSSCMSLTTITEYLSHMALMLLALERNKIKIGYRLHYNIYYVLY
LLENGPFSTNSNQDGLPQIHLTREQQAILSHDVQDDHVVKIVAFAGTGKTTTLVRYAAQR
PHLRFLYVAFNNSVASEARRRFPPNVDCKTAHSLAYNDVGRSYKTHGKLTFNVKPFSINM
VLTAGAGGYSRAKVVTTVLNAFMASADQTIGPQHVPYDYAVGKGRRNIVEPDERRFFIAE
AKSIWNKMKDVREKSKQAYYMPHDGYLKLWQLRDPKPCLTDRYDAIFIDEAQDCTPAIMD
VLLAQGCGKILVGDPHQQIYTFKGAVNALHAVHHTHIFYLTQSFRFGAEIAFVGAAILKV
CKGVKKILVGGMQKSGVCDETAEKALEAMKKGKSCSPGKIGVLSRCNLGVFKGAVQLTDA
NQQCRIHFIGGVKNIGLEKIMDIYHLMTQTGQESKKRAIKDPLIRTFFSNKDNPYLAFKK
YIIQTEDKELDGKLCIVEKYRDRIPQLVARLEACAEADFQRADFIVGTVHKAKGLEFDTV
IVTDDFTAVPASGHNLCRIQDFSFSKIPDDEWNLLYVAVTRAMSSLVVTKNILRILTVAG
EYFLKSKMPSCLVAGGDPLPCSVSECPNCVTPGSAFVMARQKMQCTECVTKEGPLCERCV
WTRIGPTAFLMTDDVLSMAEIPQQLHVPIHHPFFLELFF
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgttaaagggagagccaaacggaagcacctgaatgcgcaggaatgtgac
gaactggggcgaagcgaagacggcaccgatgctctcaccagacgcaacgcaacgcagggc
aggcgagaccccaactggggcctttaccccagaacccccacgaagcagcggcggaaaggt
ccgtttgttttaggaagtccatctgggaagcagaagcccattcatgactttttctccgta
acaaaagttatcagctccagtccgcacaaatcctcctcaatgccctccacatcaatgcac
agaccggggtcgggggtcgtattcgaggaggacgaggaggacgatgacgtcagcttgttg
gcaaccccgactgcagccgagatcgacgctgaggacgagattgacgacgacagtctgtta
gctgctgaaatgttgccagagaaggtttcctccaccgaggcccgcctgctggaggcggac
tatctggagggaatgacggcggagatgttcggagacgacgagggctttgacgacttcgag
gaggaggaggaggaggaggaggaaggagaggtggagcctcttcctgacgcccactttgga
ctcctgggcagcgacaaggccctgctgcgcccgcagggctgcgtggaggacctcccggag
gaggtgctgagggaggtgctgtgtctggttcctgccgccgacctttatcgtaacgtctgc
ctggtgtgccatcgctggaggaacatcgttctggacccgaagtttgtgcctttcaagaag
caatacttccgctacatgatgagagagaaggagacggtgctggaggttggctgcattctg
aaaaacagcaacatcaccagccctgcacctccagagcacagcatccgaaacctcgtggtg
ctaatggctcagcataaagtcggcgagcgtgtgaagccagacgacgtcctgagctgcgta
aacaaacaccggctctttcctcaggccgaagccgccgtcaggctacgcattcctgacatc
cagaagtttctccaccttggcatcgagggtcccaacccatacgcagtcatggcggtcata
ttggtcctgagtgagagcgtgggcgacgtgcaggccttggtctctctgctctccagctgc
atgtcgctaaccaccatcacagagtatctgagccacatggccttgatgctgctggcgttg
gagaggaacaaaatcaagattggctacaggttacactacaacatttactacgttctttac
ttgctggaaaacggcccgttttctaccaattctaaccaggacggactccctcagattcat
ctcaccagagaacagcaggcgatcctgagccacgacgtccaggacgaccacgtggtcaag
atagtagcgtttgcaggcacagggaagacgaccacattggtgagatacgctgctcagcgt
ccgcacctccgcttcctctacgtggcatttaacaactcggtggcttccgaggcccgacgg
cgcttccctcccaacgtggactgcaagacggcccactccttggcctacaacgacgtcggg
agaagttataaaactcacgggaagctcaccttcaacgtgaagccgttctccatcaacatg
gttctgactgctggagccggaggctacagcagggccaaggtggtgaccaccgtcctgaac
gccttcatggcctcggcggaccaaaccatcgggccccagcacgtcccctacgactacgca
gtcggcaagggccgcaggaatatcgtagagcccgacgagcgaaggttttttatcgccgag
gcaaagagcatctggaacaaaatgaaggacgtcagagagaaatcaaagcaggcctattac
atgcctcacgacggttacctgaagctgtggcagctcagagacccgaagccctgcctgacg
gaccgatacgacgccatttttatcgacgaggctcaggactgcacaccagccatcatggac
gtgctgctggcccagggctgcgggaagatcctggtgggagacccccaccagcagatctac
acctttaaaggagcagtcaacgccctgcacgcagttcaccacacacacatcttctacctg
actcagagctttcggttcggagcagagatcgccttcgtgggcgcagccatcctgaaagtc
tgcaagggcgtcaagaagattctggttggagggatgcagaaaagtggtgtgtgtgatgag
acggcagagaaagccctggaggccatgaagaagggcaagagctgcagcccggggaagatc
ggcgtcctctctcggtgcaacctgggcgtcttcaagggcgccgtccagcttacggacgcc
aaccagcagtgccggatccacttcatcggcggagtgaaaaacattgggctggagaagatc
atggacatctaccacctgatgactcagaccggccaggaatccaagaaaagagccatcaaa
gaccccctcatccggacgttcttctcaaacaaggataacccctacttggcctttaagaag
tacatcatccaaaccgaagacaaggagctggatgggaagctctgcatcgtggagaaatac
agagatcgcatcccgcagctggtggcccgactcgaggcgtgcgccgaggctgacttccag
cgagcagactttatcgttggaactgtccacaaggccaaaggtctggagttcgacacggtg
atcgtcactgatgacttcaccgccgttcccgcgtctggccacaatctgtgccgcattcaa
gacttctctttttctaagattccagacgacgagtggaacctgctgtatgtggcggtgact
cgcgccatgtcctccctggttgtaacgaaaaacatcctccgcatcctgactgtggctggg
gaatacttcctcaagtcgaagatgcccagctgtctggtggcgggcggcgaccccctgccg
tgctccgtctccgaatgtcccaactgcgtcactcctggctcggcgttcgtcatggccaga
caaaagatgcagtgtaccgaatgtgtaacaaaggagggccccctgtgtgagaggtgcgtg
tggacccgcatcgggcccacggccttcctcatgaccgacgacgttctctccatggccgaa
atcccacagcagctccacgttcccatccaccacccgtttttcctggagctatttttttga
DBGET
integrated database retrieval system
