Poeciliopsis prolifica (blackstripe livebearer): 129374337
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Entry
129374337 CDS
T09758
Symbol
nup188
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129374337 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374337 (nup188)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129374337 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup192
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
129374337
NCBI-ProteinID:
XP_054908692
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MAESEISLRSCRELWTILLGRSALRDPAQIEGELDRHWDRLHQGLGYYKPPSSSSAGKVK
EKKNVAQPLKDFGFRISKLLNLDEQQSVQLLQCYLQEDYRGTQDSLKVVLKDERQSQGLL
LKIADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSSYQSQFENLFK
AEAPTWETHGNLMTERQVSRWFMQCLREQSLLLEIIFLYYAYFEMSPSDLLNFTKMFKEQ
GFGIRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFSGFPDV
IKEMDQLLLTFGDIPHHGPVLLSWVLLRHTLRPDESNPVIRRIGNTALQLGVFQYLSSML
KGLQQEXNQCTASTAKMCIYGLLSFVITSFEEESLQANGVEGSHLIDAACEVLSAPSLAE
VFWEMKPNRGLGMILDSAAGMFPHKIGPLLQLLTALVSNKSTVKKVYNFLDKMSFYTQVY
KHKPIDIISKDDETLWRRQAPKLLYPLGSGQANLWMPQGVLGQVMIAGEQGYMVRWDYSY
SAWTLFTCEVEMLLHVVSTADVLAHCARVKPILDLVHKIISTDWTVSDCLLPLTSRIYML
LQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTNMAQCISAE
GMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGNTQSKGLIPCVLLVLKEMLP
TYHKWRYNTNGVRERIGCYILELIHAILNLSPEGEDQGSTPTLQSLCIYSLANTEAGQAV
VNIMAVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSDAVSPLEQ
ALTQHGGHGSNLVVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRD
AFLARLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGNEGSKEFLVGEWSCL
HVVLELIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKERFWENLTTPLFG
TLTPPSETTEPCVLEACAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFSNARRYDYWSQYV
KSLVCHVAETEEEGICCFPETQMLISAWRMLLILSTTHADVMHLTEDSTKLKLFMDVLDG
TKAALTTPTSVPCLRLGSMMATLLLILLKQWRSVVAAAPDILSPLALILESVLQADQHMM
DRTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETVKDEALALIDNTRHMSQTGDVL
EQEDSMETDCPRGLQKDQRDGVCVLALHLTKELCRGDEDGEHWVLVMRKVPVLPSVLSAV
EISLRCKHNLFFTEAALHLLLTLARTPLGAAAVAGAGVIQTICLPLLSVYEVSSNGTSQS
FSRKSQDSACWPGVYRLCMSLMESLLKTLRYNFINEALDFVGVHQERILQCLNAVRTVQS
LSCLDEADHTVGFLLQLSSFCKEWQFHLPNLLRDVQINLCYLCQTCTYLLHSKKMLHHYL
QSKNGEALPAGTRTQRPPQTFNKDASATASSSSGGGGEREEAEQKALLAVQCSLLKILSK
TLATLQHFTPDCCQILLDQCMDLAEYRTLFVLSFTTPAFDPEVAPSFGTLLATINVALGM
LSEMEKRKEPASLSIASLASLEEIQALKSLLMFTMENCFYVLISQAVRCLKDPAILPRDK
QRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSIQPKPSTPGSKASHEGQEPIIHL
VQAFVRLVQR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcagagatcagcctcaggagctgtcgagagttatggacgattttgctgggg
agatctgcattgagagacccggctcagatcgagggagaacttgacagacactgggacagg
ctgcatcaaggacttggttactataagccacccagctcatcctctgctgggaaagtgaaa
gagaagaaaaatgtggcgcaacctttgaaggactttggctttaggatcagcaaattattg
aatctggatgagcagcagagtgtgcagcttttacaatgttatcttcaagaggactacaga
ggaacccaagattccttaaaagttgttctgaaggatgagcggcaaagccagggactcctt
ctaaaaatagctgattactattatgaggagcggatgtgtctgcttagatgtgttctgctg
ctgctcacatactttcaggatgaacgtcatccctatcgggctgagtacagtaactgtgtc
aataaactggagaaagacttggtgagcagctatcagtcacagtttgagaatctcttcaag
gccgaagcaccgacatgggaaactcacggcaacctcatgaccgagcggcaggtgtcccgg
tggttcatgcaatgtttgagagagcagtctctgttgctggagatcatcttcctgtactac
gcctactttgagatgagcccgtctgaccttctgaacttcactaaaatgttcaaagaacaa
ggcttcggcatacggcagaccaacagacacctggttgacaagagcatggatgcactggtt
gacagaatcggatacctgagctctctcatcctggtggagggaatggacatagactttctg
cacaagtgcgctctggaggattgcacagagcagcaccaattttccggatttcctgacgtc
attaaggagatggatcagctgttgctgacatttggggacatccctcatcatggccctgtt
ctgctgtcctgggtcctgttgagacacaccctcagacctgatgagtccaatcctgtgatc
cggaggataggcaacacggcgctgcagctgggggtcttccagtacctttcatcaatgctg
aagggactccaacaggagtaaaaccagtgtacagcaagcacagccaagatgtgtatttac
ggcctgctgtcatttgtgatcacgtcatttgaagaagagagcttacaggccaacggtgtg
gagggctctcacctgattgatgcggcctgtgaggtcctctccgctcccagtttagctgaa
gtcttttgggaaatgaagccaaacagggggctagggatgatcttagatagtgcagctggg
atgttccctcacaaaatcggacctctgctgcagctgctgaccgcacttgtgtcgaacaag
tcgactgtaaagaaggtgtataacttcttggacaagatgtccttctacacacaagtttac
aaacacaaacccattgatataatttctaaggacgacgagacattgtggaggagacaggct
ccaaaactcctctaccctctgggttcagggcaggcgaacctgtggatgccccagggagtg
ctgggccaggtgatgattgcaggggaacagggctacatggtgaggtgggactactcttac
agtgcctggactctgttcacctgcgaggtggagatgctgctgcacgtcgtctccactgca
gacgtcctggctcactgtgcgcgcgtgaagcccatcctggatctggtccataagatcatc
agcaccgactggaccgtgtccgactgcttgctgcctctcacctcgcgtatctacatgttg
ctgcagaggttgacttcggtcatcaaccctccggtggatgtgatcgcctcctgtgtgaac
tgtctctctgtgctggcggccaggatgccagggaaggtgtggtccagtctgcatcacacc
ggcttcctccccttcgcctccaaccctctgaccaacatggcccagtgtatcagtgctgaa
ggaatgaaggcaggtaactacggcaacctgctggtgcagattgagcagcccagaggagag
tacgccgtaacaatcgccttccttcgtctcattacaaccttggtgaaggggcagcttgga
aacacccagagcaaaggcctgattccctgtgtgctgctggtgttaaaggagatgctgccg
acataccataagtggcgctacaacaccaatggagtcagagagagaataggttgctatatt
ttggagttgatacacgccattctcaatctgagcccagaaggggaggaccagggcagcact
cccactctgcagtccctttgcatctacagcctggccaacacagaggctggccaggccgtc
gtcaacatcatggccgtcggagtggacaccatagatgtcgtcctggctgctcagcccagc
agctgtggctctgagggtccaggtcagattctgatccagacggtcaaactggctttctcc
gtcacgaacaacgtgatccgcctaaaaccgccgtccgacgccgtgtccccgctggagcag
gcgctgacgcagcacggcggtcacggcagcaacctcgtcgtcgtcctcgccaaatacatt
taccacaaacacgacccagctctgccccgcctcgccatccagctgctgaaaaggctcgcc
acggtcgcccccatgtctgtgtacgcctgtctgggcaacgacgcggccgccatcagggac
gccttcctcgctcggctgcagagcaaaacggaagacatgaggatcaaggtgatgatcctg
gagttcctcacggtggccgtggaaacgcagcccggcctcatcgaattgttcctcaacctg
gaggtcaaagatggaaacgaggggtcaaaggagtttctggtgggcgaatggagctgcctc
cacgtggtgctggagctgattgactccaagcagcaggggaagtactggtgtcctccgctg
ctccaccgcgcagcgctggctttcctcctggcgctgtggcaggaccgcagagacagcgcc
atctccgtcctccgcacaaaggaaagattttgggagaatttgacgacgccgctttttgga
actctcaccccgccgtcggagaccacagagccatgcgtgctggaggcctgcgcgttcgtc
atgaaaatcatcggtctggagatttactacgtcgtcagtggttctctggagcagtctctg
aaggatgggcttcaaaagttctctaacgctcggcgctacgactactggtcccaatatgtg
aagtcgttggtgtgtcatgtggccgagacggaggaggagggcatctgctgcttcccagag
acacagatgctgatttctgcgtggcggatgctgctgattctttccaccacccatgcggac
gtgatgcatctaacagaggattcgaccaaactgaagctgtttatggatgttttagatggg
actaaagctgctctcaccacacccacatctgtgccttgtcttcgtctgggatccatgatg
gctactctcctgcttatcctcctgaaacagtggaggagtgtggtggcagcggctcctgac
atcctctcgcccctcgccctgatcctggagagcgtcctgcaggccgaccagcatatgatg
gaccggaccaaagccaaaatcttctctgcactcatctccgtgcttcagattcaaggcctc
aacggcggagatatttcccagctgccccagctgttgctctccgtatgcgagacggtgaag
gacgaggcgctggcgctcatcgacaacacccgacacatgagtcagacgggagacgtgctg
gagcaggaggacagcatggagacggactgtcctcgcggtctgcagaaggaccagagagac
ggggtgtgcgttcttgccttgcacttgaccaaagagctgtgtcgcggcgatgaggacggc
gagcactgggtgctggtgatgaggaaggtcccagtcctgccgtcggtgctgagcgccgtg
gagatcagcctgcgctgcaaacacaacctgttcttcaccgaggcggcgctccacctgctg
ctgacgctggcccgcactcccctgggggcagcagctgttgctggagcaggcgtcattcaa
accatctgcctgcccctgctgagcgtgtatgaggtttcctcaaacggcacatcgcagagt
ttctctcggaagtcgcaggactccgcctgctggccgggcgtttaccgcctctgcatgtct
ctgatggagagtctcctcaagacgcttcgctacaacttcatcaatgaagccctggacttt
gttggagtgcatcaggaacgcatattacagtgtctgaatgcagtgcgcaccgtgcagagc
ctttcctgtttagacgaggcagatcacacagtgggattcctgctgcagctctccagcttc
tgcaaggagtggcagttccatctccccaatctgctcagagacgtgcagataaacctttgt
tacttgtgccagacgtgcacttacctgctccacagcaaaaagatgctccaccattacctg
cagtctaagaatggtgaggcgttgcccgccggcaccaggacgcagcggccgcctcaaacc
tttaataaagatgcatcagcaacagcatcatcatcatcaggaggaggaggagagagagag
gaagccgagcagaaggccctgttggccgttcagtgcagcctgctgaagatcctgagtaaa
actttggctacactgcagcacttcactccagactgctgccagatactgctggaccagtgc
atggacctggccgagtacaggaccttgtttgtgctcagcttcacgactcccgcgttcgac
ccggaggtggcgccatcattcgggaccctgctggccaccatcaacgtggccctgggcatg
ctgagcgagatggagaagaggaaggagccggcctctctgagcatcgcctcgctggcctca
ctggaggaaatccaagctctgaagtcattgctgatgttcaccatggagaactgcttctac
gtcctgatctctcaggccgtccgctgcctcaaagacccagccatccttcctcgtgacaag
cagaggctcaaacaggagctcagctcagaactgagcactcttctctccagcctgtcgcgc
cacttcaggaggggttcaccgtcatccccagccagtgggatcctcccctccattcagccc
aaaccctccacgcccggatcaaaggcaagccacgagggccaggaacccatcatccacttg
gtccaggccttcgtcagactcgtgcaaagataa
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integrated database retrieval system
