Poeciliopsis prolifica (blackstripe livebearer): 129374386
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Entry
129374386 CDS
T09758
Name
(RefSeq) LOW QUALITY PROTEIN: PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129374386
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
129374386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HMG_box
HMG_box_2
HATPase_c
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129374386
NCBI-ProteinID:
XP_054908753
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MKQLPADTVRLLSSSQVVTSVVSVVKELMENSLDAGASSVDVKLENFGLDRIEVRDNGCG
IKAADAPVMAVRHFTSKISSHEDLERLETYGFRGEALGSICAVAEVTVTTKTEDDDVSTQ
YTLDSSGGIVSQRPSHLGGGTSVSVAKLFGKLPVRRQFFSSVRKRKEEVRKVQDLLMAFG
VITPELRLTLAHNKVVVWQKARAADTRSALVATLGASTVANLLPVHQEQPEMVLDGFLPK
PGADLSSTSSSTSDKTFIFINKRPVQQKDILKLLRQHYSPQYPDDATRHRFPVLLLNITV
CPSSLDVNVTPDKTQVLLHDKEAVLAAVEALLVSLYGFRPEKQPEPETLPRPAGCVETDE
NTENRKVSDXDAGQSAALQRQASSCSSSSSMADDWIVNQSGFSLCDDEATRSRPQSAEPG
PEEPRQPQMSAEAWSRGTALTDPASGEPLRPVAIHRPDPEVKRSGNTITEKRAVLTAYDM
ISSRTLKAPPSAASLFEKETRPEILMERPAASLQEVSAAVQNRWENLGDEGRKRFEEKAR
KSQELHDQRTRPAAAAAPEAPADRPLRAAKLQAQKRKAPLSNQQLLDELFSAQHQKKKKA
PPPKPWQPLPCSMATLRQRLQRLSAQSGVAGPRGLRPVGRLASLKAWLILCGGRRLMLLN
PFRAEEALLFQRLQQDHVLPAARLQNPLLLTDRNLGAAQFDTLCSLEKGAAEPDGSVFFS
DPRLVANGFQIKLSPAERHLEVTAVADCVPFLGLEDLKEVLTAVLQGNAASVPQSRPLKV
TNYLKAEAVRLARQLPSDLCGEEVAELLARTQRRLGGTDRTCVHGRLFLHHLGDVPSSQQ
EAGLQEAGLQEAGLHSHR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttcctgcagacacggtgcggctgctgtccagctcgcaggtcgtcacgtct
gtggtgagcgtggtgaaggagctgatggagaactccctggacgctggcgcctccagtgtc
gacgtgaagctggagaacttcggcctggaccggatcgaagttcgagacaacggctgtggg
atcaaagcggcggacgctccggtgatggccgtccgacatttcacctccaagatcagcagc
catgaagacctggagcgcctggaaacgtacggcttcaggggcgaggcgctgggctccatc
tgcgccgtggccgaggtcactgttaccactaaaacagaggacgacgacgtcagcacgcag
tacaccctggactccagcgggggcattgtctctcagaggccgtcccacctgggtggagga
acgtcggtgagcgtggcgaagctgttcgggaagctgccggtgcgacggcagttcttctcc
tccgtcaggaagcgtaaggaggaagtgaggaaggtccaggacctgctgatggccttcggc
gtcataacgccggagctgcggctcacgctggcgcacaacaaggtggtggtttggcagaag
gccagagcggcggacaccaggagcgccctggttgctacgctaggagctagtaccgtcgct
aacctgctgcccgtccaccaagaacagccagagatggttctggacggttttctcccaaag
cccggagctgatttgtcctcaacaagctcctctacctctgataaaaccttcatatttatt
aataaacgtcctgtccagcagaaggacatcctgaagctgttgcgtcagcactattcgcct
cagtatcctgatgatgcgactcggcatcggttccccgtcctcctgctgaacatcacagtt
tgtccttcatcgctggatgtaaatgtgacgcctgataaaacccaggttctgcttcatgac
aaggaggcggttctggctgccgtcgaggctctgctggtttctctttacggttttcgtcct
gaaaagcagccagagcctgaaactcttcctcgtcctgctggttgtgtggagacggatgag
aatacggagaacaggaaggtgagcgatngagatgccggccagtcagctgccctgcagcgc
caggcctccagctgcagctcctcttcctccatggcggacgactggatcgtcaaccaatcc
ggtttctccctctgtgacgacgaggcgacccgcagtcgaccccagagcgccgagcccggc
ccagaggagccgcggcagccgcagatgtccgccgaggcctggagtcgcggcacggcgctg
actgacccggcgtcgggagaaccgctgcgacccgtcgccatccaccggcccgacccagaa
gtcaagaggtcaggcaataccataacagagaaacgggccgtgctgacggcgtacgacatg
atcagcagccgcacgctgaaggcgccgccgtccgccgcctcgctgttcgagaaggaaacc
cggcctgagattctgatggagcgaccggccgccagcctgcaggaagtcagcgccgctgtt
cagaaccgctgggaaaatctgggagacgaaggcaggaagaggtttgaagaaaaggcgagg
aagagtcaggaactccatgaccagaggaccaggccagcggccgctgcggcccccgaggcc
cctgccgatcggcccctgagggccgctaagctccaggctcagaagcgtaaagctcctctg
tccaaccagcagctgctggacgagcttttctccgcccagcaccagaagaagaagaaggct
ccgcccccgaagccgtggcagccgctgccctgctccatggcgacgctgcgccagcgactg
cagcgcctgtcggcccagagcggcgtggcggggccccggggcctccggccggtgggccgg
ctggcctctctgaaagcctggctgattttgtgcggcgggcggcgtctgatgctgctcaac
ccgttccgggcggaggaagccctgctgttccagcggctgcagcaggatcacgtccttcct
gccgcccggctgcagaaccctctgctgctcaccgacagaaacctgggcgccgcccagttt
gacacgctctgcagtttggagaagggcgcggcggagccggacggcagcgtcttcttctct
gacccccgactcgtcgccaacggcttccaaatcaaactcagtccagcagagcgccatctg
gaagtgacggccgtggcggactgcgtgcctttcctgggcctggaggacctgaaggaggtt
ctgaccgccgtcctccaggggaacgccgcctcggtgccgcagagccggccgcttaaagtc
accaactacctgaaggccgaggcggtccggctcgcccgccagctgccttcagatttatgt
ggtgaagaagtggcggagctgctggcgcggacgcagcggcggctgggcggaaccgaccgg
acctgcgtccacgggcggctcttcctccaccacctgggcgacgtcccgtcctcacagcag
gaggccgggctgcaggaggccgggctgcaggaggccgggctgcactcgcaccgctga
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