Poeciliopsis prolifica (blackstripe livebearer): 129374516
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Entry
129374516 CDS
T09758
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129374516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374516
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
129374516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
129374516
NCBI-ProteinID:
XP_054908948
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MLTTGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSF
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDSTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgacgggagcggccgtgaccaacgtcacggcgctggcccaggtggaccgggag
aagatctaccagtggatcaatgagctgtccagtccggagaccagggagaatgctctgctg
gagctgagcaagaagcgggagtcggttccggacctcgccccgatgctctggcactccttt
ggcaccatcgccgcgctgctgcaggaaatagtgaacatctacccgtccatcaaccctccc
accctcaccgctcaccagtccaacagggtgtgcaatgcgctggcgctgctgcagtgcgtc
gcctcgcaccctgagacgcggtcggcgttcctggcggctcacattcccctcttcctgtat
ccgttcctgcacaccgtcagcaaaacgcggcccttcgagtacctgcgcctcaccagcctg
ggggtcatcggagctttggtgaaaacagacgaacaggaagtgatcaacttcctcctgacg
actgaaatcatcccgctgtgtctgcgcatcatggagtcagggagcgaactctccaaaacg
gtcgcgaccttcatcctgcagaagatcctcctggacgacaccggcttggcttacatctgc
cagacctacgagcgtttctcccatgtggccatgattctggggaagatggtgctgcagctc
tccaaggagccgtcggcccggctgctgaagcacgttgtccgctgctacctgcgcctctcg
gataacctcagagccagagaggcgctgcgtcagtgtctgccggaccagctgaaagacagc
accttcgcccaggttctgaaggacgacaccaccaccaagcgctggctcgctcagctcgtc
aagaacctgcaggagggccaggtgacggacgcccgcggcatcccgctcgccccgcagtga
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