Poeciliopsis prolifica (blackstripe livebearer): 129374585
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Entry
129374585 CDS
T09758
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprl03036
]
129374585 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprl04812
]
129374585 (clasp1a)
Chromosome and associated proteins [BR:
pprl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129374585 (clasp1a)
Cytoskeleton proteins [BR:
pprl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129374585 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
Sec7-like_HUS
Cnd1
Adaptin_N
RTP1_C1
ParcG
TAN
HEAT_DAAF5
MMS19_C
Paxt-1_C
DUF2726
Motif
Other DBs
NCBI-GeneID:
129374585
NCBI-ProteinID:
XP_054909028
LinkDB
All DBs
Position
Unknown
AA seq
1614 aa
AA seq
DB search
MEPSMESCLAQVLQKDVGRRLQVGQEVIDYILDRNKSPELEQDQTALDKMVDAVASSWVN
SSNFKVNLLGLDLLSALVTRLQDRFRTHIGTVLPSLMDRLGDARDQVREQDQVLLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTSGAQGLTLSKIVPHICSLLGDPV
AQVRDGAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFSRFDEVQRSGNMMPSSGSDK
NFEDEDSLDGGRSSSSSSSKAPPTGRRAVVSSVRRPGSASSTKSTGKDAAAGAVDEDDFV
KVFEDVPPVQFYSNRELEDQLTKIRDVLSDDKHDWEQRVVALKKVRSLVLAGAPDHEGFP
HQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSVLRNKFDHGAESVMPTLLNLVPNSAK
VMATSGVAAIRLILRHTHYARLIPIITSNCSSKSVAVRRRCYEFLDLLLQEWHTSTLERH
VAVLAETVRKGIHDADSEARSIARKCYWGFHGHYSREAELLFQALEATYQKALQSHLKSS
DSIVSLPQSDRSSSSSQESLNRPLSVKSVIGSSFTRSKLAGSRASAAPGSLQRSRSDIDV
NAASSAKSRLGGVPASSPFGGAAALPPGSYASLDGAAAKSDGRVRTRRQSSGSVGGASPS
AVDSRGRSRAKVVSQSQRSSSANPISAGSRSSSPGKLLGQSYGRIPRVAAPPATAAERRS
RIPRSQGCSRETSPSRPGQARSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLASRRHS
RSTSALSSAEPHGQSEEEGKSQAAGSLHYSAVRLDFVDRYGLIHQARISASVNAMRVLNT
GTEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIP
HYLRQTEDVAEVLNHCASSNWSERKEGLMGLQNLLKSQRILSRVELKRLCEIFTRMFADP
HSKVFSMFLETLVDFVTVHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRES
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKFCVQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHSHLKNSS
NTSSSSVGSPSNTVGRTAPRHAPSRSSPLTSPTNCSHGGLSPSLLWGWGVDGLLPAAPPA
APLPQSAPAAPGLRALRRAFSPSVTEYDTENMNAEEIYSSLRGVTEAIQSFSYRSQEDLN
EPLRRDGKRDDAVGREVVAPSPGPDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRS
REFAPYGETICAYDKSALKEAVFDDDVEQFRDCRRKDSGENKTSPPKGFCPVGPDHSDLV
ADLLKELSNHNERSEERRAALLELLKVTREDSAPLWDEHFKTVLLLLLETLCDKEHTIRA
LALRVLKEILRNQPTRFRNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCI
KVLCPIVQTADYPINLAAIKMQTKVIERIAKDSLLQLLPDIIPGLLQGYDNTESSVRKAS
VFCLVAIYAVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagagctgcttggcgcaggtcctgcagaaggatgtgggccggcgg
ctgcaggtgggacaggaagtcatcgactacatcctggacaggaacaagtcccccgaactg
gagcaggaccagacggcgctggacaagatggtggacgccgtcgccagctcctgggtcaac
tccagcaacttcaaggtgaatctgctgggcctggacctcctgtcggctctggtgacccgc
ctccaggaccggttcagaacccacatcggaacggttctgccaagcctgatggatcggctg
ggagacgccagggaccaggtgagggagcaggaccaggttctgctgctgaagattatggag
caggccgcctcccctcagtatgtctgggaccggatgctgggaggcttcaagcataagaac
aaccggaccagagagggagtgtgcctgtgtctcatcgccacgctgaacacgtccggagcc
caaggcttgacgctgagcaagatcgtcccacacatctgcagcctgctgggagaccccgtg
gcccaggttcgggacggcgccatgagctgcctggtggagatctaccgccatgttggggag
cgggtgaggctggacctcagcaagaagggccttccccagtcacggttgaatgtcatcttc
agcaggtttgatgaagtccagagatctgggaacatgatgccatcttctggttctgataaa
aactttgaggatgaagactctctggacggaggccggtcctcttcgtcgtcctcctccaag
gcgcctcctactggacggagggcggtggtgagctccgtgagacggcccggttctgcttcg
tccaccaagtccacaggaaaggacgcggctgctggagccgttgatgaagacgactttgtg
aaggtgtttgaggacgtcccgccagtccagttctattccaacagggagctggaggaccaa
ctgaccaagatccgagacgttctgtctgacgacaaacacgactgggaacagcgcgtggtg
gcgctcaagaaggtgcgttctctcgtcctggccggagcgccggaccatgaaggcttcccg
caccagctgcggctgctggaggcaccgctgaagctgtcggccaaagacctgcgctcccag
gtggtccgagaggcctgcatcacgctgggacatctgtcctccgtcctgcggaacaagttt
gaccacggagcagagagcgtgatgccgaccctgctcaacctggtaccaaacagcgccaag
gtcatggccacatccggtgtggcggccatccgcctcatcctcaggcacacccactacgct
cgcctcatccccatcatcaccagcaactgcagctccaagtctgtggctgtcaggaggcgc
tgctatgagttcctggacctcctgttgcaggagtggcacacgtcgaccctggagagacac
gtggccgtcctcgccgaaaccgtccggaagggaattcacgacgccgactccgaagcccgc
tccatcgccaggaagtgctactggggtttccatggccactacagccgggaggcggagctt
ctgttccaggcgctggaggccacctatcagaaggcgctgcagtcgcacctgaagagctcc
gacagcatcgtgtcgctgccgcagtcggaccgctcctcctcctcctcgcaggagagcctc
aaccgacctctgtctgtgaagagcgtcatcggaagcagcttcaccagaagtaagctggcg
ggctccagggcgtcggccgcgccgggctctctgcagcgttcccgtagcgacatcgacgtc
aacgccgcttccagcgccaagtcccgcctgggaggcgtcccggcctcctcgccgttcggc
ggcgccgccgccctgcccccggggtcgtacgcctcgctagatggcgctgctgctaagagt
gacggtcgtgttcgtacaagaagacagagctccggaagcgtgggcggagccagtccgtca
gcagtggacagcagggggcggagtcgagccaaagtggtctcccagtcgcagcgatccagt
tcggccaatcccatcagcgccggcagtcgctccagttcaccaggaaagctgctgggccag
agctacggccgcatcccgagggttgctgcaccgcctgccaccgccgcagagagacgcagc
aggatcccccgcagccagggctgcagccgcgagaccagccccagcaggccgggccaggcc
cggagccgcatcccacgccccagcatgagtcagggctgcagccgcgacaccagtcgcgag
agcagccgcgacaccagccccgctcggggcttcgctcctctggcctccagacgccactcc
cgttccaccagcgctctgtcctcagcagaaccccatggccagtcagaagaagaaggcaag
tctcaggcagccggttcccttcattactcagcggtccgtcttgattttgtagatcgatac
ggtctgatccaccaagccaggatttctgcgtcggtgaacgccatgcgggtcctgaacacc
ggcaccgaggtggaggcggccgtggccgacgctctgctgctaggagactccaggaacaag
aggaagccattgcggcggcgctacgagtctcctgggatgtactctgatgacgacgccaac
agcgacgcatccagcgcctgctcagagcgctcctacagctccaggaacggcggcatcccc
cactacctgcggcagacggaggacgtggctgaggtgctgaaccactgcgccagctccaac
tggtctgagaggaaggagggcctgatgggcctgcagaacctgctgaagagccaaaggatc
ctcagccgggtggagctgaagagactctgtgagatcttcaccaggatgtttgcagacccc
cacagtaaggtgttcagcatgttcctggagacgctggtggactttgtcacagtccacaag
gacgacctgcaggactggctcttcgtcctgctcactcagctgctgaagaagatgggcgcc
gacctgctgggctcggtccaagccaaggtccagaaggctctggacgtcaccagggagtcg
ttccccttcgaccagcagttcaacatcctgatgcgcttcattgtggaccagacccagacc
cccaacctcaaggtcaaagtcgccattctgaagtacatcgagtctctggctcgccagatg
gacccgaccgactttgtgaactccagcgagacacgactggcggtgtcccgcatcattacc
tggaccaccgaacctaaaagctctgacgtcaggaagttctgtgtgcaggcggcccaggtg
gttctgatcgcgctgtttgagctgaacacgccggagttcaccatgctgctgggcgcgctg
cccaagaccttccaggacggcgccaccaagctgctgcacagccacctcaagaactccagc
aacaccagcagcagcagcgtggggtctcccagcaacacggtgggccggacggcgccgcgc
cacgcccccagcaggtccagcccgctcacttcccccaccaactgctcccacggcggcctg
tctcccagtcttttgtggggatggggggtcgacgggctgctccccgctgcgccccctgcc
gcccccctgcctcagagcgcccctgccgcccctggcctcagggccctgcgccgagccttt
tcacccagcgtgacggagtacgacacggagaacatgaacgcagaggagatctacagctcg
ctgcgcggcgtcaccgaggccatccagagcttcagctaccgcagccaggaggacctgaac
gagccgctgcgccgcgacggcaagagggacgacgccgtgggaagagaagtcgtggctcca
tctccaggtcctgatgctcgtctgggtttagatgtggtggaaggcggccgcaccgccctg
gacaacaagacgtcgctgctcaacaccccgtcgccacggtccttctctgggccccggagc
cgcgagtttgccccctacggtgaaaccatctgcgcttacgataagagcgcgctgaaggag
gccgtgttcgatgacgacgtggagcagttccgtgactgccggcggaaggattcaggtgaa
aacaagacgagtccccctaaaggcttttgtcctgtcggaccggaccattcggacctggtg
gcggacctgctgaaggagctgtccaatcacaacgagcgcagcgaggagcggcgcgcggcg
ctgctggagctgctgaaggtcacgcgggaggacagcgcccccctgtgggacgaacacttc
aagaccgtcctgctgctgctgctggagacgctctgcgacaaggaacacaccatccgggcc
cttgccctgcgggttctgaaggagatcctgaggaaccagccgacccggttcaggaactac
gccgagctgaccatcatgaagaccctggaggcccacaaggactcccacaaagaggtggtg
cgtgcggccgaggaggcggcgtccacgctggccggctccatccacccggagcagtgcatc
aaggtgctgtgccccatcgtccagaccgccgactatcccatcaacctggccgccatcaag
atgcagaccaaggtcatcgaacgcatcgccaaggactcgctgctgcagctgctgcccgac
atcattcccggcctgctgcagggttatgacaacacagagagcagcgttcgtaaggccagc
gtgttctgcctggtggccatctacgccgtgattggagaggagctgaagccccacctggca
cagctgacgggcagcaagatgaagcttctgaacctctacatcaagcgggcccaaaccacc
aacagcaacagcagcagctcctccgacgtttcctctcacagttaa
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integrated database retrieval system
