Poeciliopsis prolifica (blackstripe livebearer): 129374671
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Entry
129374671 CDS
T09758
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129374671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprl03021
]
129374671
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129374671
Transcription machinery [BR:
pprl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129374671
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129374671
U7-dependent histone pre-mRNA processing factors
129374671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
129374671
NCBI-ProteinID:
XP_054909178
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MASKRKAELLVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEDSMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCAQGQRVSGILVKKNFNYHILNPSDLSTYTELAMSTVKQNQAIPFTGPYSLLVCHLRNL
TGDVEELDGTEKKTLKIFKSITLVHEVGMVVLEWVANPLNDMYADAVTTVVLEVQSNPKA
QKVMETQSTTMDMDVFQTRLEVMLQDMFGEDCVDFSDGKVISVTVDGQTVHISLETRAVY
CEDDVSEDDSLREMVELAVQRLYDALNPAL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaagcggaaagcagagctgctggttcctgctgaggaaagcgaccagctgctc
atccggcctctaggcgcaggccaggaagttggcagatcttgtatcatcctggagttcaaa
ggcaggaaaattatgctggactgcggcatccatccggggttagaggggatggatgctctg
ccctacatcgacctgattgaccctgcagagatcgacctcctcctcatcagccattttcac
ttggatcactgcggcgctctgccctggttcctgcagaaaaccagctttaagggccggaca
ttcatgacgcacgccaccaaggccatctaccgctggctgctgtcagactacgtcaaagtc
agtaacatctctgcagatgacatgctgtacactgagactgacctggaggacagcatggat
aaaatcgagaccatcaacttccatgaggtgaaggaagtggccgggatcaagttctggtgc
taccatgctggccatgtgctgggagcggccatgttcatgatcgaaatagctggagttaaa
ctgctgtacacaggagacttctccagacaggaagacagacatctgatggcggcggagatc
cccagcgtcaaacctgacatcttaattatagagtcgacctacgggactcacatccatgag
aagagggaggagcgcgaggctcgattctgcaacacggtgcacgacatcgtcaaccgggag
ggccgctgcctgattcccgtgttcgccctgggacgggcccaggagctgctgctcatcctg
gatgaatactggcagaatcacccagaactccacgacattcccatctattacgcctcatct
ctggccaagaagtgcatggctgtctaccagacctacgtcaacgcaatgaacgacaaaatc
cgcaaagcaatcaacatcaacaacccctttgtgttcaaacacatcagcaatctgaagagc
atggaccactttgatgacatcggccccagcgtggtgatggcgtcgccgggtatgatgcag
agcggcctctccagggagctgttcgagagctggtgcaccgataagaggaacggcgtcatc
atcgctggatactgtgtggagggaacgctagcgaagcacatcatgtctgagccggaggag
atcaccaccatgtccggacagaagctgccgctcaagatgtcagtggactacatctccttc
tccgcccacaccgactaccagcagaccagcgagttcatccgggccctcaagccgcctcac
gtgatcctggttcacggggagcagaacgagatggcccgcctgaaggcggcgctgatccgg
gagtacgaggataacgaccaggtccacatcgaagtgcacaaccctcgcaacacagaggcc
gtcactctcaacttcaggggagagaagctggccaaggtgatgggttcgctggctgataag
aaatgtgctcagggtcagagggtgtctggcatactcgtgaagaagaacttcaattaccac
atcctgaatccatccgacctctcaacgtacacagagctggccatgagcacggtgaagcag
aaccaggccatcccgttcaccgggccgtactcgctgctcgtctgccacctgaggaacctg
acaggggacgtggaggagctggacggcaccgagaagaaaacgctgaagatctttaaaagc
atcactctggtccacgaggtcgggatggtggtgctggagtgggtcgccaatccgctgaac
gacatgtatgctgacgccgtcaccaccgtggtgctggaggtccagtccaacccaaaggct
cagaaagtcatggagacgcagagcaccacgatggacatggacgtcttccaaacccggtta
gaggtcatgctgcaggacatgtttggagaggactgtgtggacttcagcgatgggaaagtc
atttctgtgacggtggacggacagacggtccacatcagcttggagacgcgggcggtttac
tgcgaggacgacgtctcagaggacgactccctcagagagatggtggagttggccgtgcag
cggctctacgacgccctgaacccggcgctctga
DBGET
integrated database retrieval system
