Poeciliopsis prolifica (blackstripe livebearer): 129374794
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Entry
129374794 CDS
T09758
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03030
DNA replication
pprl03410
Base excision repair
pprl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129374794 (pole2)
03410 Base excision repair
129374794 (pole2)
03420 Nucleotide excision repair
129374794 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pprl03032
]
129374794 (pole2)
03400 DNA repair and recombination proteins [BR:
pprl03400
]
129374794 (pole2)
Enzymes [BR:
pprl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129374794 (pole2)
DNA replication proteins [BR:
pprl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
129374794 (pole2)
DNA repair and recombination proteins [BR:
pprl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
129374794 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
Motif
Other DBs
NCBI-GeneID:
129374794
NCBI-ProteinID:
XP_054909413
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MDVSRKIKTRVSTGFGMRGFTLRPEASRYLVEVLESVDSSELDDVIEKVLDAVEKQPLSS
NMIELSVVEGAVQDCTQAGDDAIDNVFNIIGAFDVPRYIYSVERKKFVPISMTSHPAPSL
CGLARDKAELFRERYTILQQRTHRHELFTPPAIGAAVVEGQNKFQLRTIEALLGSTAKLG
EVIVLGMITQLKEGKFYLEDPSGTVQLDMSKAQFYNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTESSSSTRAYYGNINFFGGPSATSVKASSKLKQLEEENEDAMFVMVSDVWLDSVE
VMEKLSIMFSGYAALPPTCFIFCGNFSSAPYGKTQIKSLRESLKTLADVICSYPSIHSSS
RFVFVPGPEDPGPGTILPRPPLADHITQDFQQRVPGSVFTTNPCRIQYCSQEIVIMREDL
VNKMCRNCVRLPNSNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVIV
FADKYDPFSISSADCLCLNPGSFPRSGFTFKVYYPSNRTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctcgcaaaataaagacgagggtttccaccggcttcgggatgagaggcttt
actctgcggcctgaagccagcaggtacctggtggaggttctggagtcggtggactcctct
gaactggacgatgttattgaaaaggttctggacgcagtggagaagcagccattgtcctcc
aacatgatcgagctgtctgtggtggaaggcgccgttcaggactgcactcaggccggcgat
gacgccatagacaacgtgttcaacatcatcggagcttttgacgttcccagatacatttac
agtgtggagaggaagaaatttgtgccgatcagcatgacgagccacccggcgcccagcctg
tgcggtttggccagagataaagctgagctcttcagggagcgctacaccatcttacagcag
cgtacgcatcgccatgagctgttcacgccgccggccatcggagctgcggtggtggaaggt
caaaacaagtttcagctgaggacgattgaagcgttactgggaagcacagctaaactggga
gaggtgatcgtactgggaatgatcacacagctgaaagagggtaaattttacctggaggac
ccgagtgggacagtacagctggacatgtccaaagcacagttttataatggtctgtacaca
gagtcctgctttgtgctggcagaaggttggtacgaagactcggtcttccacgttaacggc
tttggattcccaccaacagagtcttcgtcttctacaagggcgtactacggcaacataaac
ttcttcggcggtccgtccgccacctcagttaaagcttcatccaagctgaagcagttggag
gaggagaacgaagacgccatgtttgtgatggtctctgacgtctggctggacagcgtggaa
gtgatggagaagctcagcatcatgttctcaggatacgctgctctgcctccaacctgcttc
atcttttgtggaaacttttcttctgctccttatggaaaaactcagattaaatccctcaga
gaatcattgaagaccctggctgatgtcatctgttcgtatcccagcattcatagcagcagt
cgttttgtgtttgttcctggcccggaggaccccggccctggcaccatcctgcccaggccg
ccgctggcagatcacatcacacaggacttccagcagagggtgcctggctccgtgtttaca
accaacccatgcaggattcagtactgcagccaagagatcgtcatcatgagagaagatctg
gtcaacaagatgtgcaggaactgcgtccggctgcccaacagtaacctcgacatcccaaat
cattttgtgaagaccatcctgtcccagggacacctgactcctcttcctctctacgtcagt
ccggttttctgggcctacgactactccctgcgggtctaccccgtgcccgacgtcatcgtg
ttcgcagacaagtacgacccgttctccatctccagcgccgactgcctgtgtctcaacccg
ggctcgtttcctagaagcggtttcacgttcaaggtgtactacccgtccaacagaaccgtt
gaagacagcaaacttcaaggactttaa
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