Poeciliopsis prolifica (blackstripe livebearer): 129374965
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Entry
129374965 CDS
T09758
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04136
Autophagy - other
pprl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129374965 (atg4c)
04136 Autophagy - other
129374965 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129374965 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129374965 (atg4c)
03029 Mitochondrial biogenesis [BR:
pprl03029
]
129374965 (atg4c)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129374965 (atg4c)
Membrane trafficking [BR:
pprl04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129374965 (atg4c)
Mitochondrial biogenesis [BR:
pprl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129374965 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
129374965
NCBI-ProteinID:
XP_054909658
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MASKGSDEVDKLKTKFMSMWYSVKYSWALKSKTAFSRKSPVFLLGKCYNLQAEDKCATVD
LLEGSENLVMGNLEAFRQDFASRLWLTYREDFPPLPGSTLTTDCGWGCMLRAGQMIMAQG
LVLHFLDRDWIWPEAHSLEALDVETRTSTAAKRFVASLQSTSRISESRLSLVPQAQAEEA
DAQLKEMYHRNLVSWFADISSAPLGLHRLVHLGMRIGRRAGDWYGPGMVSHMLKDAVKEA
MEPGLEGITVYVSQDCTVYDEDVLDLHKAVKAGEASGETAASPPVAEHSQLSTSTPPEYQ
AVIILIPVRLGGDKTNPEYFDFIKKILRLEYCIGVIGGKHRQAFYFVGFQDDSLIYMDPH
YCQSFVNVSASDFPLQSYHCPSPKKMPFSKMEPSCSIGFYSRNPQDYQRFREEMSKLVEP
SLQGKYPVFTFMQGRSAEQECPFRERYRTFATVGDFVLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaaagggagcgacgaggtggacaaactgaagacaaagttcatgtcaatgtgg
tacagtgtgaagtacagttgggcacttaaatccaagactgcatttagtagaaaatcccca
gtgtttcttcttgggaagtgctataatttacaggcagaagataaatgtgccactgtagac
ttgcttgaaggctctgagaacctcgtcatggggaacttagaggctttccgacaggatttt
gcatctcgtttgtggctgacgtaccgggaagatttccctccactgccaggcagcaccctg
accacagactgtggctggggctgcatgctgagggctgggcagatgattatggctcagggt
cttgttctgcacttcttggacagagactggatttggccagaggcgcactccctcgaggcc
ttagatgtagaaacgcggaccagcacagcggctaagcgatttgtcgcctctctgcagagc
acatccaggatttctgaaagcagactgtctcttgtacctcaagcccaagcagaagaagca
gatgcacagttaaaggagatgtaccacagaaatctggtgtcctggtttgcagacatctcc
tcagctccactgggtctgcacagactggttcatttaggaatgaggattggaagacgggca
ggggactggtacggtccagggatggtgtcacacatgttgaaggatgctgtcaaggaagcg
atggagcctggcttggagggtataactgtctacgtctcccaggactgcacagtgtacgat
gaggatgtcctggacttgcacaaggctgtgaaagcaggagaagcctctggtgagacagca
gccagtcctcctgttgcagaacacagccaactgtcaacctccacaccgccagagtaccaa
gcagtcatcatcctcatccctgtgaggctgggaggagacaagacaaacccagagtatttt
gactttataaaaaagatattgcgtctggagtactgcataggcgtcattggagggaagcac
aggcaggccttctactttgtgggatttcaagacgacagcttgatttacatggaccctcat
tactgtcagtcttttgtgaatgtcagcgccagcgatttccctctccagtcataccattgc
ccctcaccaaagaagatgcctttcagcaagatggagccaagctgctctataggtttctac
tctaggaatcctcaagattatcagagattcagggaagaaatgtccaagttggtggagccg
tcactgcaggggaaatatccggtgtttacttttatgcaaggtcgcagcgcagagcaggaa
tgcccctttagggaaaggtacagaaccttcgccacagttggagactttgtgcttctctga
DBGET
integrated database retrieval system
