Poeciliopsis prolifica (blackstripe livebearer): 129375013
Help
Entry
129375013 CDS
T09758
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129375013
09123 Folding, sorting and degradation
03018 RNA degradation
129375013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129375013
03041 Spliceosome [BR:
pprl03041
]
129375013
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129375013
mRNA cycle factors
Stress granule specific factors
129375013
Spliceosome [BR:
pprl03041
]
Complex C
Other components
Complex C specific factors
129375013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RBD_RDR6
RRM_occluded
YflT
POP1_C
Motif
Other DBs
NCBI-GeneID:
129375013
NCBI-ProteinID:
XP_054909763
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGDDMDDEKLRELFSKYGNALSTRVMTDDSGKSRGFGFVSFER
HEDAQKAVDEMNGKDLNGKPIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRA
AYYPAAGQMAQLRPSPRWTTQGVRPQHFQNMTGAMRASAPRPQTFSTLRPTNQVPRMMST
QRVATQTVAPRPPAAATATTAPVRGVPQYKYAAGVRNPQQHISSQPQVNLQQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQNMHASLAGKITGMLLEIDNSELLHMLESPES
LRSKVDEAVAVLQAHQAKEAAQKTVTNSAVVPSV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgctcccagttatcccatggcctccctgtatgtcggggacctgcatcca
gatgtgaccgaggccatgctgtatgagaaattcagcccagccggagccatcctctcgatt
cgggtctgtagggacatgatcacccggcgttccctcggatacgcctatgtcaatttccaa
cagccggcggacgctgagcgcgctttagacaccatgaacttcgacgtgatcaaagggcgg
cctgtacgcatcatgtggtcgcagcgtgatccgtctctgagaaaaagtggcgtgggaaac
atcttcatcaagaatcttgacaagtcgattgacaacaaggctctttatgacaccttctct
gctttcgggaacatcctgtcctgcaaggtggtttgtgatgagaatggctctaaaggctac
ggctttgtgcattttgagactcaggaagctgctgaacgagccattgaaaaaatgaacggc
atgctgctcaatgacagaaaagtgttcgttggccgtttcaaatctcgtaaggagcgcgag
gctgagttgggcgcccgggcaaaagagtttactaatgtttacatcaaaaactttggtgac
gatatggacgacgagaaattgagagagctcttcagtaaatacggaaatgcgctgagtacc
cgggtcatgacagatgacagcggaaagtccagaggctttggcttcgtcagctttgaaaga
cacgaagacgcgcagaaggcagtggatgaaatgaacggaaaggacctgaatgggaagccc
atctacgtcggccgcgctcagaaaaaggtggaacgacagacggagctgaagcgcaaattt
gagcagatgaaacaagaccgtatgactcgctaccagggtgtcaacttgtatgttaaaaac
cttgatgatgggattgatgatgaacgcctgcggaaggagttctccccattcggcaccata
accagtgccaaggtcatgatggaaggcggccgcagcaaaggcttcggttttgtctgcttc
tcgtccccggaggaggcgaccaaagccgtgacagagatgaacgggcgcatcgtggccacc
aagccgctgtacgtggctctggctcagaggaaagaggagcgccaagcccacctgaccaac
cagtacatgcagcgcatggccagcgtccgcgccgtgccaaatcccgtcatcaacccctat
cagccggccccgccctctggctacttcatggctgccatacctcaggcacagaaccgcgcc
gcctactaccccgctgcgggccagatggctcagctgcggccgagcccacgctggacgacc
cagggggtccgacctcaacactttcagaacatgaccggtgccatgcgtgcgtcagcgcca
cgccctcagaccttcagcaccttgcggcccacaaatcaggtccctcgcatgatgtccacc
caacgcgtcgctactcagaccgtggctccccgaccgcctgccgcagccacagcaacaact
gctccagtgcgtggagttcctcagtacaagtacgccgcaggagtccgcaaccctcagcag
cacatctcctcccagccacaggtcaatctgcagcagcctgcggtccatgttcagggacag
gagcctctgaccgcctccatgctggccgccgctccgccgcaggaacagaagcagatgctg
ggtgagcgtctgttcccactgatccagaacatgcatgccagcctggcaggcaagattact
ggcatgctgctggagatcgacaactcagagctgcttcacatgctggagtccccagagtct
ctccgctccaaggtggatgaggctgtggctgtgctgcaggcgcatcaggccaaggaggcc
gctcagaagactgtgactaactcagctgttgtcccaagtgtttga
DBGET
integrated database retrieval system
