Poeciliopsis prolifica (blackstripe livebearer): 129375025
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Entry
129375025 CDS
T09758
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129375025 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129375025 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprl00535
]
129375025 (sdc3)
Proteoglycans [BR:
pprl00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
129375025 (sdc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
GAP45
SDH8
GIP4
Equine_IAV_S2
Motif
Other DBs
NCBI-GeneID:
129375025
NCBI-ProteinID:
XP_054909779
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MKLPWLLALAALLAHTATAQKWSQPADDEGSTRDDFYDDEDLYSGSGSGSSDIGVKPTTS
GVTFTTEEPILFSTTQATSPAPSASPAAEPSPSPEDVVSTVFPTEADGESGIYMEIERER
EKDRELERERQMEREREREQIREIERQREREREQEREKERERERERQRERELERQRELER
IRAAQTTAAPRSPAVFPVSTTGLTTSAVESAGPSAGSDDPLSPDEGEEDVYLSPEPTSVD
PGSDVETTADYDYDASTTAETTPEPTTAAPTTTPATTTKTRIPFRPRVPASRTTQGVPTE
RTTRPQPPAATQEGSNEVGAAGPTGDSEIGKDRRNNLGLMPDFSGNTVDSGSSAAQLPQK
NILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQ
EEFYA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggctgcttgcgctagccgcgctgctcgctcacaccgccacggcgcag
aagtggtctcaacccgctgatgacgaaggctcgacgagagatgacttttacgacgacgag
gacctctactcgggctccggctctggctcctctgacatcggcgtgaagccgacgacatcc
ggcgtgaccttcaccacagaggagcccatcctcttctccaccacccaggcgacaagcccc
gccccctcagcctcacctgcggccgagcccagccccagcccggaggacgtcgtctccacc
gtgttccccaccgaggctgatggagagagcggcatctacatggagatagagagggagagg
gaaaaagacagggaactggagagagagagacagatggaaagggaaagagaaagagagcag
atcagagagatagaaagacagagggagcgagagagggagcaggaaagagagaaggagcgg
gagagagagagggagaggcagagagagcgggagctggagaggcagagggagctggagaga
atccgggcggctcagaccaccgccgccccccgctcgcccgccgtcttccccgtgtccacc
accggcctgaccaccagcgccgtggagagcgcagggccctctgctggctcagacgacccg
ctcagcccggacgaaggcgaggaggacgtgtacctgtcgccggagcccacctcggtcgac
cccggctccgacgtggaaaccaccgcagattacgattacgacgcgtccaccacggcggag
accacgcccgagcccacgacagccgcacccaccaccacacctgcgaccaccaccaagacc
agaatccccttcaggccccgggtcccggcgtccaggaccactcagggcgtcccgacggag
agaacgacccgcccacagccgcccgcagccacacaggagggaagcaacgaggtgggcgcc
gcaggcccgaccggcgactctgagatcggcaaggaccgcaggaataatctcggcttaatg
cccgacttcagtgggaacacggtggacagtggcagctctgctgcccagctgccacagaag
aacatcctggagaggaaagaggtcctaatagccgtgatcgtgggaggcgtggtgggcgcc
ttgttcgccgccttcctggtgatgctgctggtgtacaggatgaagaagaaggacgagggc
agctacacgctggaggagcccaaacaagccacggtcacctaccagaaacccgacaagcag
gaggagttttacgcataa
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