Poeciliopsis prolifica (blackstripe livebearer): 129375140
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Entry
129375140 CDS
T09758
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129375140 (rnf115b)
04121 Ubiquitin system [BR:
pprl04121
]
129375140 (rnf115b)
Enzymes [BR:
pprl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129375140 (rnf115b)
Membrane trafficking [BR:
pprl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129375140 (rnf115b)
Ubiquitin system [BR:
pprl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129375140 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
Zn_ribbon_19
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
Zn_ribbon_6
Rad50_zn_hook
U-box_ZFPL1
DUF7571
Motif
Other DBs
NCBI-GeneID:
129375140
NCBI-ProteinID:
XP_054910004
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MAEAAETPQHRFYCHFCKTETEPQMPDLVCPTCESDFIEEVTEDSSFLQDRASSVTNAES
NFQLPDIWQLVFMERSALLSHPPSSGSSPEDNQQVSPGSPLVAELQEQDSPFNSEEDESI
RPDEIPAVPGIMLQVLSDLLATSGNSSSTPTALSSMMQLYSNPGDYAWGQGGLDAVVTEL
LERMESTGPPPAKKEMISLLPTVCVSQEQIDCRLECPVCREEYSLAESVRKLPCLHYFHS
ACIVPWLELHDTCPVCRKSLDGVDNNLPPTSQPQDELSDRQEQQEREAI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggaaacgccacaacaccggttttactgccacttctgcaagacagag
acggagccccaaatgccggatttggtctgccccacatgtgagtccgacttcatcgaggag
gtaacagaagactccagtttcctccaggatagagcgtcatcagtaacaaatgcagagtca
aacttccagttgccagacatatggcagctggtgttcatggagcgctccgccctgctttcc
cacccgccctcttccgggtccagcccagaggacaaccagcaggtatctccagggtcccca
ctcgttgcagaattgcaggaacaggactcgccgtttaactctgaggaggacgagtctata
aggcctgacgaaattcctgctgtacctgggatcatgctgcaggttttgtctgacctgtta
gccaccagcggaaactcttcttccaccccaaccgcactatcaagcatgatgcagctgtac
tcaaacccgggagattacgcctggggacagggaggcctcgacgcagtcgtcacagagtta
ttagagcggatggagagcacgggtccaccgccggctaaaaaggagatgatctcattgctg
cccacagtttgcgtctctcaagaacagatagactgccgactagaatgtccagtttgtagg
gaggaatattcgcttgctgagtctgtcaggaagcttccctgcctccattacttccacagc
gcctgcatagtaccttggttggaactgcatgacacctgcccagtgtgccgcaaaagtctc
gatggcgtcgacaacaacctcccgcccacatcgcagccccaagacgagctctctgacagg
caagagcaacaagagagggaggcaatttga
DBGET
integrated database retrieval system
