Poeciliopsis prolifica (blackstripe livebearer): 129375345
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Entry
129375345 CDS
T09758
Symbol
cpsf2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129375345 (cpsf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129375345 (cpsf2)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129375345 (cpsf2)
U7-dependent histone pre-mRNA processing factors
129375345 (cpsf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Beta_lactamase3
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
129375345
NCBI-ProteinID:
XP_054910346
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MTSIIKLTAVSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDAMKRYVHQVDAVLL
SHPDPIHLGALPYAVGKLGLNCTIYATIPVYKMGQMFMYDLYQSRSNSENFTLFTLDDVD
SAFDKIQQLKYSQIVSLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLESISRPSLLITDSFNAAYVQPRRKQRDEQLLTNVMETLRGNGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYPLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLNLCHSLADLARVPSPKVVLCSQPDLESGFSRELFTQWCQNAKNSIILTYRTT
PGTLARYLIDNPGEKMLDLEVRKRVKLEGKELDEYLEKEKIKKETAKKLEQAKEVDVDSS
DESDMEDDLDQPAAVKTKHHDLMMKGEGSRKGSFFKQAKKSYPMFPVHEERIKWDEYGEI
IRIEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSVVPTKCVSSVENFEIRARVTYID
YEGRSDGDSIKKIINQMKPRQLVIVHGPPEASLDLAESCKAFSKDIKVYTPKLQETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDTELAWIDGVLDMRVAKVDTGVMLEEGVKEEAEDSE
VPMDTAPELGINQNATAVAAQRAMKNLFGEDEKEMSEESDVIPTLEPLPPTEISGHQSVF
INEPRLSDFKQVLLREGIQAEFVGGVLVCNNVVAVRRTEPGRIGLEGCLCDDYYKIRELL
YQQYAVV
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattatcaagctgacagccgtgtcgggggtccaggaggaatcggctctttgc
tacctgctgcaggtggatgaatttcgcttcctcctggattgtggatgggacgagaacttc
tcaatggacatcattgatgccatgaagcgatatgttcatcaggttgatgcagtcctgctg
tcgcaccctgaccccattcacctgggagccctgccctatgctgtgggcaaactgggactg
aactgcaccatttatgccaccattcctgtctacaaaatgggtcagatgttcatgtatgat
ctatatcagtcaagaagcaacagtgaaaatttcacgctcttcaccctggatgacgtggac
agtgcttttgataaaatccagcagctgaaatactcacagattgtcagtctgaaaggaaag
gggcatggtctgtcgatcactcctctcccagccggacacatgattggaggcaccatttgg
aaaattgtcaaggacggagaggaggagatagtttatgcagtggacttcaatcataagaga
gaaatccaccttaacggctgctcactggagagcattagtcgaccgtctttactcattaca
gattccttcaatgctgcttatgtacagccacgccgcaaacaaagagacgagcagctgctt
acgaacgtaatggagaccctgcgtggaaatggcaatgtccttattgccgtggatacggcc
ggccgcgtgttggagctagcgcagctcctcgaccagatttggaggacgaaggatgctggg
cttggagtttaccctctagcactgctcaacaacgtcagctacaacgtggtggagttctcc
aagtcccaggtggagtggatgagtgacaaactcatgaggtgttttgaggacaaaaggaac
aatccattccagttccgacacttaaacctttgccacagtctggcagacctggcccgggta
cccagccccaaggtggtgctttgcagccaaccggaccttgagtctggcttctccagggag
ctcttcacccagtggtgccaaaatgctaaaaattccatcatccttacctaccgcaccacg
cctggcaccctggcccgctatctcatcgacaatcctggagaaaagatgctggatttggag
gtgagaaaacgagtaaaattggaagggaaggagctggacgaatatcttgaaaaggagaaa
ataaagaaagaaacagctaaaaaactggagcaagccaaagaggtggatgtggattcgagc
gacgaaagcgatatggaagatgatctggatcagccggctgcggtgaaaaccaaacaccat
gacctgatgatgaagggcgaagggagccgcaaaggaagcttcttcaaacaggccaaaaag
tcatatcccatgttcccggtgcatgaggagagaatcaaatgggacgagtatggagaaatc
atcaggattgaagattttttggttcctgaactgcaagccacagaagaggagaagagcaaa
ctagaatctgggctgacaaatggtgatgaacccatggaccaggatttgtctgtcgttcct
acaaaatgtgtctcaagtgttgagaattttgaaataagagcgagggtgacatatatagac
tacgaaggtcgctctgatggcgactccataaagaagatcataaatcagatgaagcccaga
cagcttgtgatcgttcacgggccaccagaagcaagtctggacctggctgagtcctgcaaa
gctttcagcaaagacatcaaagtttacacacccaaactgcaggagactgtggacgccacc
agtgaaacacacatctaccaggtgcggctgaaagactccttggtgagctctttgcagttc
tgcaaggcaaaagacacggagctggcctggatcgacggtgtgctggacatgcgcgttgcc
aaggtggacaccggcgtgatgctggaggagggtgtgaaagaggaggcggaggacagcgag
gttcccatggacaccgcccccgagcttggcatcaaccaaaacgccacggccgtggcggcg
cagcgtgccatgaagaacctgtttggagaggatgagaaggagatgtcagaggagagcgac
gtcattcccactctggagccgctgcctcccactgagatttcaggccatcagtctgtgttc
atcaacgagcctcggctgtctgacttcaagcaggtcttactgagagagggcatccaggct
gaatttgtgggtggagttctggtgtgcaacaacgtggtggccgtccgcaggacggagcct
ggacgcatcggcctagaaggctgcctgtgtgacgactactataagatccgggagctgctg
tatcagcagtatgctgttgtgtag
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integrated database retrieval system
