Poeciliopsis prolifica (blackstripe livebearer): 129375447
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Entry
129375447 CDS
T09758
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprl01002
]
129375447 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprl04121
]
129375447 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129375447 (usp13)
Enzymes [BR:
pprl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129375447 (usp13)
Peptidases and inhibitors [BR:
pprl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129375447 (usp13)
Ubiquitin system [BR:
pprl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129375447 (usp13)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129375447 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
Motif
Other DBs
NCBI-GeneID:
129375447
NCBI-ProteinID:
XP_054910513
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPKTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKTTGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETNYPLAVK
LDTITPDGADVYSFEEEEAVLDPHMSEHLSHFGIDMLQMQRRTENGHHTDNNPRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVSNGHQQRGISPRMLKALV
SRGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDSFRFLVEERVQCCQSRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEVKRKEAEENTRAPPEPVRARIPFTACLQAFMEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGIDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMSSTDSPEIDEGAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPLPSTSDSPMGATPLDNLPPEESI
AILTSMGFPRNHSIRALKATNNNLERALDWIFTHPEEEESDGFSDMADTEPNDNAFSNLN
SHSDSTLSPDRETSGPRVKDGPGRYEVFAIISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtccccttcatgcccaccatcagagtccccaaa
acaggagacagagtctacaagagcgagtgcgccttctccttcgactcccccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaaacgacatgttaaagagaaa
accacaggtgctgccggaggtgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaaccgagattttaacggagaggactatgagtatgaggatgaggcaaagctc
gtcattttcccagaccacttcgagatccctttaccaaatattgaggagctgcccgctctg
gtgaccatagcctgtgatgcagtgcttaacgcaccttcagcttacaagaagcaagaaccc
gagtcatgggaggaggagatccaggtgtcaagacatgccagaagcctcagacagctggat
aacggagtccggatcccacccagtggctggaagtgtcagaaatgcgagatgagagagaac
ctgtggctgaacctgacagacggttcggttctttgtgggaagtggttctttgatgggagc
gggggcaacggccacgctctggagcactacagagagaccaactacccactggctgttaaa
ctggacaccatcactccagacggagcagatgtttattcgtttgaggaggaagaggctgtt
ttggacccacacatgtcagagcacttgtcacactttgggatagacatgctacagatgcag
aggagaacagaaaatggacaccacacagacaataacccccgaccgcgagtcagtgagtgg
gaagtgatccaagagtcgggcatgaagctgaaggcggtgtttggttctggttacactggc
atcaaaaacctgggaaacagctgctacctcagcacagtgctacaggtcctgttcagcatc
ccagatttccagaggatgtatgtaggtaaccttcagaggatatttgactactcacccctt
gaccccacccaggattttgccacacagatggctaaactgggacacggactcctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtatcaaacgggcaccaacagaggggaatctctccccgaatgctcaaggcactggtc
agcaggggacacccagagttttcctccaacagacaacaagatgcccatgagttcttcctg
caccttatcaacttggtggaaagaaacagtgctggttcagagaatccaagcgactcattt
cgtttcttggtggaggagagagttcagtgctgtcagagtcggcgggttcgttacactcag
cgggtcgactactgcatccagctaccggctcccatagaagcagcgacgaatagagaggag
ttgcttgcatatgaggtcaagcggaaagaagctgaggagaacacgcgggctcctcctgaa
ccggtgcgagcacggatccctttcacagcctgccttcaggcctttatggagcctgaaaac
gtccccgatttctggagttcagcgttgcaggccaagtcagctggagtgaaaacgtcccgc
ttcgcctcgttcccagagtatcttgttgtgcagatcaagaaattcacctttggtattgac
tgggtgccaaagaagcttgacctggccatcgatgttccagacttcttggacctgagccgg
ctccgagccacagggctgcaggcgggcgaagaggagctgccggatctcatgcctcccatt
gttttaccggaagacaccagagataactccatgagctcaactgactctccggagatagat
gaaggtgccgttatgcagctggcagagatgggttttccactggaggcctgcaggaaggcg
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgaacctctcactttgccctcaatgatggatcctcttccctct
accagtgacagccccatgggggcgacgccactggacaacttgcctccggaggagagcatc
gccatcctcacctcgatgggatttcctcgcaatcacagcatccgcgctctcaaagccacg
aataataatcttgagcgagcactcgactggatcttcacccacccagaggaagaggagagc
gacgggttctctgacatggcggacacggagcccaacgacaacgccttttccaacttgaac
tcgcacagcgactccacgctgtccccagacagagaaacatcaggcccaagagtcaaagat
ggaccaggacgatatgaggtgtttgccatcatcagccacatgggagcctccacaatgtct
ggacattatgtttgtcacatcaaaaaagagggaaggtgggtgatctacaatgaccacaag
gtgtgtttgtcagaaaggcctccaaaggacttgggctacatctacttttaccgtcgcctc
tcgagcagttaa
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integrated database retrieval system
