Poeciliopsis prolifica (blackstripe livebearer): 129375630
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Entry
129375630 CDS
T09758
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129375630 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprl03019
]
129375630 (dcp1b)
Messenger RNA biogenesis [BR:
pprl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129375630 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
129375630 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Zip
Motif
Other DBs
NCBI-GeneID:
129375630
NCBI-ProteinID:
XP_054910842
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MSSAASHSCLAAKGLDISLSALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEGTL
FIYTRLASPRHGFTIMNRLNMENLTEPITKDLDFQLQDPFLLYRNARLVIHGIWFYDKQD
CQRIAQRMRILTQQEQILAQSQGGSLSPRAVAREGAVLVGGNNEAKAVDIIQMLNKARTE
YDKSTSEPKEIGGSSVLCGNPNLIKPIPVKPNTQVNEGADTTAVTLTTLLGSQHQHHNAL
KPDPVPPLAASMAAGKVARPPVARTLTYEDSLNSGRNSGRNAVPSGGGDPVVGPADREDS
GNALRQLPNQLQHCPAIAKLIQGQRGAGGAGGVLQTLSESPENRLCDNGVQQEHHHHHHP
HHHHHQHPHLHHHHQEQQHDPIKRLLQNHPPLLLATSFTAAVPPALQQNPYPSSQPGQLD
SVSRSHLEAQQGQQLLLGLTKLQADIQKRGPTDSAAMGTGLSSQMQGVVSPHELLQKLQL
VQQEQSLTSHEHPRLHPHPGLAPRFLGPGASQSQGSSLGTGPTRTSVAPDQKAELQFQII
SPQRIPATVAPTLLLSPSVFTQTKSSSRLPVAAPESSSVPSTLCKPSLQEEVRALSRSQL
QAALLHLIQTDSSFLDSIYTAYVSRFANSSGSKY
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcagctagccatagctgccttgctgctaaaggactcgacataagtctgtct
gccctgcagagacaagacccttacataaacaacattgtggacgtggcgagccaggtcgcc
ttgtacacttataataatcgagcaaatgagtgggagaagacggaagtggagggcactttg
tttatttacacaaggttggcatctcctcggcatggcttcacaataatgaaccgtcttaat
atggagaatctgacagagcccatcactaaagacttggacttccagctgcaggaccctttc
cttctttaccgtaatgcacgattggttattcatgggatctggttctacgataagcaggac
tgtcagcgaattgcacaaaggatgaggattttgacccagcaggagcagatcctcgctcag
tctcagggtggttccttatccccaagagcagtagcaagagaaggagctgtcttagtcgga
ggaaataacgaggcgaaagcggtcgacatcattcagatgttgaacaaggcacgaacagag
tatgataagtctacctcagagccaaaggagattgggggcagcagtgtactgtgtggaaat
cctaatctgatcaaaccaataccagttaaaccaaacactcaggtcaatgagggagcagac
accacggctgtgaccttaaccaccctgttaggctctcagcatcagcaccacaacgctctt
aaacctgacccagttcctcctctggctgcttccatggcagcaggaaaggtcgcccggcca
cccgtcgcccgcacactgacctacgaggattcactaaactctggcagaaactctggcaga
aacgccgtcccttccggaggtggagaccctgtagtcgggccggcggacagggaagacagt
gggaacgctctccgtcagctgccgaaccaacttcagcactgtccggccattgcaaagctc
atacaaggacagaggggggctggaggagctgggggcgtgcttcagacactgtccgagtcc
ccagagaaccggctgtgtgacaatggggtgcagcaagaacaccaccaccaccatcatcct
caccatcaccatcatcagcacccccacctccaccaccaccaccaggagcagcagcatgac
ccaataaagcgtctcctgcaaaaccatccaccccttctactcgccacttctttcactgcc
gcagttcctccggcgctgcagcagaacccttatccctcctcccagcctggccaactggat
tctgtgtcacgttcccacctagaagctcaacaaggtcagcagctcctccttggcctgaca
aagttacaggcggatatacagaaaagagggccgacggattctgctgccatgggaacaggt
ttgtcatcccagatgcagggtgtggtttctcctcatgagctcctgcagaaactccagctg
gtacagcaggaacagagcttgacgtcccacgagcatcctcgactccatccgcatccagga
ctggcacctcgattcctgggccccggtgcgagtcaaagccaaggctcatctttaggcacg
ggcccaacccggacttcagttgccccagatcagaaagctgagctgcagtttcagatcatc
tcccctcagcggatacctgccacagtggcccccaccctgctcctctctcccagtgtgttc
actcagacgaagtccagcagcaggctaccagtggctgctccagaaagcagctctgtaccc
tcaaccttatgcaaaccctcactgcaggaggaggtcagagctctttctagaagccagctt
caagcagcactgctgcatctgattcagactgacagctcattcctggactccatctataca
gcgtacgtcagccgcttcgctaacagctccggcagcaagtactga
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