Poeciliopsis prolifica (blackstripe livebearer): 129375644
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Entry
129375644 CDS
T09758
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129375644 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pprl04030
]
129375644 (smo)
G protein-coupled receptors [BR:
pprl04030
]
Frizzled / Smoothened family
129375644 (smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Motif
Other DBs
NCBI-GeneID:
129375644
NCBI-ProteinID:
XP_054910858
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MSSQSRSPIVGMLCVWAAWLSGCRAVLAPNGTMFEDSCKKTSTCEVLKYNTCLGSPLPYT
HTSLILAEDSSSQEEAFEKLTMWSGLRNAPRCWSVIQPLLCAVYMPKCENGRVELPSKSL
CLATRRPCSIVDRERGWPSFLKCEKFPVGCSNEVQKLKFNTSGQCEAPLVKTDIQSSWYK
DVEGCGIQCDNPLFTEEEHNDMHAYIAYFGTITLLCTFFTLATFLADWKNSNRYPAVILF
YINACFFVGSIGWLAQFLDGARKEIVCKSDNTMRLGEPSSSETLSCVTIFIIVYYSLMSG
VIWFVMLTYAWHTSFKALGTTHQPLSGRTSYFHMVTWSIPFVLTVAILAIAEVDGDSVSG
ICFVGYKNYHYRAGFVLAPIGVVLVVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINET
MLRLGIFGFLAFGFVFITFGCHFYDFFNQAEWERSFREYVLCEANVTIASQTNKPIPECT
IKNRPSLMVEKINLFSMFGTGIAMSTWVWTKATFLIWKRTWFKIIGRSDNEPKRIKKSKM
IAKAFAMRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNEPSNDVSSAWALHVPKMVAR
RGAILPQDISVTPTGTPVPPPEERNRLWMVEADISPEMIKRKKKKKKRRKEVRNPDEVVE
NQTRLQREFGRSSVPRLPKLPCHPSLVANLRQQQRHQTLEQGVLPGSLPDYEPCEERCSY
LECQSSRNGYLMTRVDCPENLGLGPSCHPLTSNWQPSGSSSYPREVEHTDGLSERMAHVA
RVPAGRRAGYGPIHSRTNLMEAELMDADSDF
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagagtcgaagccccattgttgggatgctttgcgtctgggctgcctggctg
tcgggctgcagggcagtgttggccccgaatgggactatgtttgaggacagctgcaagaaa
acctccacttgtgaggtgcttaagtacaacacatgtttgggttcacctttaccctacacc
catacatctctgatcctggcggaggactccagcagccaagaggaggcttttgagaagctg
accatgtggtctggattgcgaaatgccccacgttgctggtcagtcatccagccactgctc
tgtgccgtctacatgccgaaatgcgagaatggacgagtggagctgcccagcaagagcctg
tgtctggccacacgtcgcccgtgcagcattgtggatcgggagagaggatggcccagtttc
ctcaaatgcgaaaaattccctgtgggctgttcgaatgaagtgcagaagctgaagttcaac
acatcaggccagtgtgaagcccctctggtgaagacagacattcagtcaagttggtacaag
gatgtagaaggttgtggtatccagtgcgacaaccccttgttcaccgaagaggagcacaat
gacatgcatgcctacattgcttactttggcacaatcacactcctctgcacctttttcact
ctggccacatttcttgctgactggaaaaactcgaaccgctacccggctgtcattctcttc
tacatcaatgcctgcttctttgtgggcagcatcggctggctcgcccagttcctggacgga
gctcgcaaagagattgtgtgcaagagtgacaacaccatgcggctcggggagccctcatct
tcagaaacgctctcgtgcgtcaccatcttcatcatcgtctattactccttgatgtcagga
gtgatttggttcgtcatgctgacctacgcctggcacacctccttcaaggctctaggtaca
actcaccagccactgtctggacggacctcctacttccacatggtgacctggtccattccc
tttgtcctcacggtggccatccttgctatagctgaggtggatggagactctgtgagtggg
atctgctttgtcggctacaaaaactaccattaccgagccgggtttgtgctggctcccatt
ggagtggtgcttgttgttggtggttactttctcattcggggtgtcatgaccttattttcc
atcaagagtaaccacccaggactactgagtgagaaagcagccagcaaaatcaatgagaca
atgctgagactaggtatatttggattccttgcatttggctttgttttcatcacattcgga
tgtcacttctatgacttcttcaaccaggctgaatgggagagaagcttcagagaatatgtg
ctatgtgaagccaacgtgacaatcgcctctcaaaccaacaagcccatcccagaatgcacc
attaaaaaccgtcccagcctgatggtggagaagatcaacctgttctccatgttcggcaca
ggaatcgccatgagcacctgggtctggaccaaagccaccttcctcatctggaaacgcact
tggttcaagatcattggtcgaagtgacaacgaacctaagaggataaagaagagcaagatg
attgcaaaggcgttcgcaatgaggaaggagctgcacaaggacccggagaaggagctgtcc
ttcagcatgcatactgtgtcacatgatggcccagtggctggaattaattttgacctgaac
gagccgtccaatgatgtttcatcagcatgggctctccatgtacccaagatggtcgccaga
cggggagccattctgcctcaggacatttctgtcactcccactgggactccagtgccccct
ccagaggagaggaacagactgtggatggtggaggcagacatatcacctgagatgataaag
aggaaaaagaagaagaagaaaaggaggaaggaggtgcgtaaccctgacgaggtggtggaa
aaccagactcgccttcagcgagagtttggccgcagctcagttcctcgcctgccgaaactt
ccctgccacccaagcctggtggccaatctacgtcaacagcagaggcatcagacactggag
cagggggtcctgccgggctcattgccagattatgaaccctgcgaggaaaggtgttcatac
ttggagtgccagagcagcagaaacggttacctgatgacccgagttgattgtccagaaaat
ctgggcctcgggccaagctgtcaccctttgacttcaaactggcagcccagtggatcgtcc
agttacccccgagaggtggagcatactgacgggctgtcagagagaatggctcatgtggct
cgggtaccggcgggccgcagggcaggctacggacccatccactccaggaccaatttgatg
gaggcggagcttatggatgctgactctgacttttaa
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