Poeciliopsis prolifica (blackstripe livebearer): 129375645
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Entry
129375645 CDS
T09758
Symbol
si:dkey-159a18.1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129375645 (si:dkey-159a18.1)
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Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
129375645
NCBI-ProteinID:
XP_054910859
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Position
Unknown
AA seq
826 aa
AA seq
DB search
MIWTTVILGGLCVLHIALLLLAEGSSSSSRPWGRTVTFRRDKRAPRLRRDTSSSTDSSNP
SRGPAFASCQLPLTPTEHKILDDNTQETGFNGDDGSHVILTWVGDGTGVILVLSTISAPL
DSYLAGGSSRLYRSTDYGKSFHDISHRINHTFIKEELGISVGPGSSVILTADTPIVDNPG
GIIFTSMDAGATFKSTQLPFHLDQSITYHFFNPDYLVALSIDDGLWLSLDFGARWTKVHE
GVHSFSWGAGTNLFFSCSRVDAVEAEERGDLVLKRTKDLGKTFTIIHEDVFSFGYIGAFL
FFSVMEDPRSPRVMYFSSDQGETFSQALLPSASTEQFYSILDGDEDMLFMHVDNPGDTFF
GTMYTSDDRGILFTKSLERHLFDGHRKSDFTNITSLRGVYLTNKLDVDGRIRSVISFNRG
GTWRQLKKPQNVNCADYVKHCNLHIHGEHSRKNHIVPMLALSEPTAVGLVIAHGSVGDSL
SSSQHPDVFVSSDGGYNWRGTLRGPHHYSILDSGGLIVAVEVHREGQVKTIKFSTDEGQC
WKSYNFTEQPFFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWVAVTIDFQSLITRECNKK
DYEEWLAHSTDKRNSERNGCVLGMKETYRRLKKQSVCRNGRNFVVTKKQVPCPCTREDYL
CDYGYYRHMNTSECVRQPNTPNKTFEMCLNGEEDELLSAGYRKVPSDKCQGGFAPQDVVQ
TIIRPCGVKPSPDPSVKSTSVGHFDTPKERLVLILVSAGAAVIVLVAIVSAVLVVKRGVH
RTRMPAYRFSNLRIQDDNNGITAEIESAASSNGTACQHDSDVDLLE
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgatctggaccactgtgatcctcggtgggctgtgcgtcctccacattgccctccttctc
ttagccgaggggagcagcagcagcagccgtccctggggaaggacggtcactttccggcgg
gacaaacgggccccacgcctccggagggacaccagcagctccacagactcttcaaaccct
tctcgcggtcctgccttcgcctcctgccagcttcccctcaccccgaccgaacacaagatt
ctggacgataacacacaggagacagggtttaatggtgatgacggctcccatgtgatcctc
acatgggtgggcgatggtacaggagtgatcctggtgctgtcgacaatcagcgctccgctc
gattcttacctggcgggaggctcatctcgactttaccgaagcacagattatggcaagtct
tttcacgatatctcccaccgcatcaaccacaccttcattaaagaggagcttggaatcagt
gttggaccagggagctcagtgatactgactgcagacacacccatcgtggacaacccggga
gggatcatcttcacctctatggatgccggagcaactttcaaatccacccagctgcccttt
cacctggatcagtccattacttaccacttcttcaaccccgactacttggtggcccttagc
atagacgacggtctttggctctcgctggactttggtgctagatggacaaaagttcacgag
ggagtgcattctttctcatggggagcaggcacgaatctgttcttcagctgcagccgggtt
gatgcagttgaagcagaagaaagaggagatttagtgttgaagaggacgaaggacttgggg
aagaccttcactataattcacgaggacgtcttcagttttggctacattggagcctttctc
ttcttctctgtgatggaggacccaaggtctcctcgtgtcatgtacttttcatcagaccaa
ggagagaccttcagtcaggctcttctgccttctgcatcaacagagcagttttactccatc
ctggacggagacgaggacatgctcttcatgcatgtggacaacccaggagataccttcttt
ggaaccatgtacacgtcagatgaccgtggaatattgttcaccaagtcgctggaacgacat
ctgtttgacggacacaggaagagcgatttcaccaacatcacctcactgaggggagtttat
ctaactaataaactagatgtcgatggccgaataagatcagtcatctccttcaacagagga
ggaacatggaggcagctgaagaagccccagaatgtgaactgtgcagactatgttaagcat
tgtaaccttcacattcatggagaacacagtcgtaaaaaccatatagttccgatgcttgct
ctgtctgagccaactgccgtcggtctcgtcattgctcacggctctgtgggcgattctctc
tcgtcatctcagcacccagatgtgtttgtttcctcggatggggggtataactggagaggc
acccttaggggccctcaccactacagcatactggactctgggggtctcatagtggctgtg
gaggttcaccgtgaaggacaagtcaagaccatcaaattctccactgatgaaggccagtgc
tggaagtcgtataacttcaccgagcagcccttcttcttcgcaggcctggcctctgagcca
ggcaccaaggccatgaatgtcagcgtgtggggcttcaggccagaggaagacggtcagccg
atgtgggtggctgtcactatcgacttccagagcctcatcaccagagaatgtaataagaag
gactatgaagagtggctggctcattctacagacaaaaggaactcggagagaaacggttgt
gtccttggtatgaaggaaacctacaggaggctgaagaagcagtctgtgtgcagaaatggg
cgaaacttcgtggtcaccaagaagcaagtcccatgtccatgcaccagagaggactactta
tgtgactatggctactatcgtcacatgaacacctcagagtgtgtgaggcagccaaatact
ccgaacaaaacctttgagatgtgtctgaatggagaggaggatgagcttctgtctgctggg
taccgaaaagtcccaagtgacaagtgtcagggtgggttcgctcctcaggatgtggtgcag
acaatcattcgaccatgtggggttaagcccagtcctgacccttcagtcaagtccacatca
gttggacactttgacacaccaaaagaaaggcttgtcctgatcctggtgtctgctggagca
gcagttattgttctagtggccattgtctctgcagttcttgttgtcaagagaggtgttcat
aggaccaggatgccagcgtatcgtttctctaatcttcgcatccaggatgataataatggc
atcacagcagagatcgagagtgctgccagcagcaatggtacagcttgccagcatgactca
gatgtggatcttctcgaatga
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