Poeciliopsis prolifica (blackstripe livebearer): 129375852
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Entry
129375852 CDS
T09758
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pprl00535
]
129375852
Proteoglycans [BR:
pprl00535
]
Extracellular matrix (ECM) proteoglycans
Others
129375852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
Fn3_nematode
Pga1
Motif
Other DBs
NCBI-GeneID:
129375852
NCBI-ProteinID:
XP_054911175
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MQFSVRLSFFLLGFVFIAVLPHTAKGQVSSPRRFRAKVLGQDKLEVSWKEPKGDFEGYKV
IYITRPGGQQKVLELAKQETKLVIKDYDPSKDYNFKISAVNGGKESKPLQGKHEAQQSGS
VTAQTQGTKKSDVTRENNEISEAENGFLCKTPAIADIVILVDGSWSIGRINFRLVRAFLE
NLVNAFSVEFDKTRIGLAQYSGDPRIEWHLNAHTTKEAVIEAVKNLPYKGGNTLTGLALT
FILENSFKVESGSRPGVPKIGILITDGKSQDDVIPPAQSLKNAGIELFAIGVKNADENEL
KAIASPPEETHVYNVADFSVMSDIVEGLSKTVCDRVEQLDRKIKGAGEPAPPVTSITPPR
NLVTSDITARSFRVTWTHAPGQVEKYRVVYYPASGGQPEEKVVLGTENSVELTYLNSLTE
YQVAVFAVYRSSASEALRGSATTLALPTVNNLELFDITHSTMRVRWKIAAGASGYMILYA
PLTEQEAADEKEVKVGDSVNEVELEGLTPATEYTVTVYAMYGEEASDPMTSQQTTLPLIP
ASNLRFQDVDHSSVRITWDSPSRLVRGYRIMYVKTSGVQTTEVDLGAVTSHLLKNLTSLT
EYTVGVFAVYKEGEAPAVTESFTTKMVPDPMNLKSSDISSDGFRVSWQHPASDVLLYRLT
WTPTDGGDNEEVLVNGNINTYLIKELEPASEYEVLLAAIYANEVESDEMVLIETTAKRTT
TVATTTTTTLTPRYAVKNLKIDEETTFSMRVSWQAVDSRNIRHYQLTYISARGDRAEESR
TVPSGQTSLVLQPLLSDTQYKVTVIPVYNEGDGPVSSEMGRTLPLSAPRNLRVSEEWYNR
FRISWDVPPSPTMGYRVVYQPLTAPGQALETFVGEDVNTMLILNLLSGTEYSVKVIASYT
TGSSEALAGKAKTLYLGVTSLSTYQVRMSGVCAQWVPHRHASTYRLVVQSVTGSQKQETR
LGGGASRHCFSNLKPNTEYKISIYSQLQDGTEGPAVTANVKTLPIPTPAPAKPPTTTPPP
TIPPAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTVGALDRIGPDGTQVAIAQF
SDDARTEFKLNSYGNKERLLDAINKISYKGGNTKTGRAIQHVKENIFTAEGGARRGIPNV
LVVLTDGRSQDDVNKVSKEMQMSGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDA
FQRIEEKLVTFVCEAATATCPSIPMSGSTTPGFRMMELFGLVENKYNSISGVSMVPGTFN
AFPCFHLHSNALMAQPTRFIHPEGLPSDYTITLLFRVLPDTPEEPFAIWEILNKNNDPLT
GVILDNGGKTLTFFNNDFRGEFQTVTFEDPEIKKLFFGSFHKLHIAISKTSAKVFIDCKM
VAEKSINAAGNISTDGVEVLGRMVRSRENKDNSAPFQLQNFDIICSTSWANRDKCCELPG
LRKEVDCPALPKACTCTQDSKGPAGPPGVPGGPGIRGARGDRGEPGPVGPAGPVGDTGVP
GPQGPPGPQGPSGRSIIGPAGSAGERGQKGEAGQQGQQGIPGRPGPVGREGPPGPRGLPG
KDGPQGRQGPPGTMGTPGSPGSPGNTGAQGKQGTLGPPGPPGTKGEKGERGDLQSTASVQ
AIARQVCEQLIQSHMSRYNTILNQAPSPPVSIRTVPGPPGEPGREGPPGPQGEQGPPGRP
GFPGQNGQNGNPGERGQPGEKGDKGSAGVGVQGPRGPPGPPGPQGQGRPGSQGPTGRPGN
PGTSGRPGVPGPVGPPGPPGYCDQNSCLGYNVGEGEEITDIRSIPPVQLPSSVFQNYGEA
EEDDPYRYYQPNYPAPQPVSPDDPALAQDDVELRSPGVYRSKRSSKAEEEQAGTKRRIKR
GVKNPPKLTN
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcagtcagactgagcttcttcctgctgggctttgttttcatcgcagtgttg
cctcacacagcaaaaggccaagtttcatcaccacggagatttcgtgcaaaagtcctggga
caggacaagcttgaggtatcatggaaggagccgaaaggagattttgaaggatacaaggtt
atttacatcacacgtccaggtggacaacagaaggtgcttgaactagcaaagcaggaaaca
aagctggtcattaaagattatgacccctcaaaagattacaactttaagattagtgctgtg
aatggtgggaaggagagcaaacctcttcaaggaaaacatgaagctcagcaatcaggctct
gtaacagctcaaacccaggggactaaaaagagtgatgtcacacgagaaaacaacgagatc
tcagaagctgaaaatggattcttgtgcaagactcccgccatagccgacattgtgatcctg
gtggatggctcttggagtatcggtcggattaactttaggctggttcgagccttcctagaa
aaccttgtcaatgccttttctgtggaatttgacaaaacaagaattggacttgctcagtac
agtggagaccccaggattgagtggcatctgaatgctcacactaccaaagaggctgtgata
gaggctgtgaaaaacctgccctataaaggaggaaacacactgacaggtctggctctcacc
tttatactggaaaacagcttcaaagtagaatctgggtcccggcctggtgttccaaaaata
ggaatcctcatcactgatgggaaatcccaagacgatgtgattcctcctgcccaaagcttg
aagaatgctgggatagaactatttgctattggtgtgaaaaacgcagatgaaaacgagctg
aaggccattgcgtctcctcccgaggagactcacgtatacaacgtggcagacttcagtgtg
atgagtgacatcgtggaaggtctctccaagaccgtctgtgaccgtgtggaacagcttgac
agaaaaataaaaggagcaggagagccagctccgcccgtcacctctattacacctcctcgt
aatcttgtgacatcagatataacagctcgcagttttcgggttacatggactcacgcacca
ggccaggttgagaaatatcgagtggtgtactacccagccagtggaggacaaccagaagaa
aaagtggttttggggacagaaaacagtgtggagctgacttacctgaactccctcacagag
taccaggtggccgtttttgccgtctaccgaagctctgccagtgaggccctgagaggaagt
gccaccacattggccctgcccacagtgaacaacctagagttgttcgatatcacccacagc
accatgagggtccgctggaagatcgccgctggggcttcaggttacatgatcctgtacgcc
ccgctgactgagcaagaagctgcagatgagaaggaggtgaaagtgggtgattctgtaaat
gaggtggagctggaagggttaactccagccactgaatacacagtaacagtttatgccatg
tatggagaggaggccagtgatcccatgaccagccagcagaccacattgccactcatccca
gcaagtaacctacgtttccaagacgtggaccacagctcagttcgcataacttgggattcc
ccttctaggttggtgcgaggctaccgcatcatgtacgtcaagaccagcggagtccaaact
actgaggtggacctcggtgctgtgacgagccatttgctcaaaaacctgacctccctgacg
gagtacacagtcggggtctttgctgtctacaaagaaggagaagctccagcagtgaccgaa
agcttcactacaaagatggttccagacccgatgaatctgaaaagcagcgatatctcctca
gatggtttccgggtgtcatggcaacaccccgcctctgatgtgctgctgtatcgactcacc
tggacgcccaccgatggcggagacaatgaggaggttctggtgaatggaaacatcaacacc
tatctgattaaagaacttgaacccgcctccgaatatgaagtcctcctggctgctatctac
gcaaatgaggttgagagtgatgagatggtgctaatagaaaccactgctaagaggacaact
acagttgctacaacaaccacaacgacattaacacctcgttatgctgtgaagaacctgaag
atcgatgaagaaaccacatttagcatgcgggtgtcgtggcaggctgtagactccagaaac
atccgtcattatcaactgacctacatcagtgccaggggagacagagcagaggagtcgagg
acggtgccctcaggtcaaaccagcctggttctgcagcctctcctttcagacacacagtac
aaagtcactgtgattcctgtttacaatgagggagatggccctgtatcctcagaaatgggt
cggacacttcctctttcagctcctaggaacctccgtgtgtcagaagaatggtacaaccgc
ttcaggatcagctgggatgttcctccttcgcccactatgggctacagagttgtctaccag
cctcttactgcccctggacaggcgctggagacttttgttggagaggatgtgaacaccatg
ctgatcctcaacctcttgagtgggacagagtacagtgtcaaggtcatcgcatcctacacc
acaggatccagcgaggctctagcaggaaaggccaagactttgtatcttggagtaaccagt
ctgagcacatatcaagtgaggatgtctggtgtttgtgctcagtgggtgcctcaccggcat
gccagtacctacagactggttgttcaatctgtgactggtagtcagaagcaggagaccagg
ctcggtggaggtgccagcagacactgtttcagcaacctgaagcccaacacagagtataag
atcagcatatactcccagctacaggatgggactgaaggacctgctgtcactgcaaatgtg
aagacattaccaatcccaacaccagctccggccaagcccccgaccaccactccaccaccc
acaatccctcctgcgaaggaagtttgtaaggcagccaaagcggacctggtctttttagtt
gatggatcctggagtatcggtgacgacaacttcctgaagattatccgtttcctgtacagc
accgtcggagctctggatcggataggcccagatggcacacaggtggccattgcccagttc
agtgacgacgctcggactgagttcaagctgaactcctacggtaacaaagagcgtctgctt
gatgccatcaacaagatctcctacaagggaggaaacactaaaacaggccgagccatccag
catgtgaaggaaaacatctttacagctgaaggaggagccaggagaggaatccctaatgtc
cttgtagttctgactgatggccgatcccaggatgatgtcaataaagtttccaaagagatg
cagatgtcaggttacattgtgtttgctatcggcttcgctgatgccgactatggagagttg
gtgagcatcgccagtaaaccgagcgacaggcacgtcttcttcgtggacgacctggacgcc
tttcagaggatcgaagagaagctggtgacctttgtgtgcgaggccgctactgcgacttgc
ccatcaataccaatgagtggcagcacaaccccaggattccgtatgatggagctgtttgga
cttgttgaaaataagtacaacagtatctctggtgtttccatggtacctggcaccttcaat
gcctttccctgcttccacctgcacagcaacgctctgatggcacagccaaccaggtttatc
catcctgaggggcttccctctgactacaccatcaccctgctgttcagagtgctgcccgac
acgccggaggagccctttgctatctgggagatcctcaataagaacaacgatccactaact
ggagttatcctggacaatggaggaaaaactttgacattcttcaacaacgacttcagggga
gagtttcagactgtcacatttgaagatccagaaatcaaaaaactcttctttggaagcttt
cacaagctgcacattgcaatcagcaagacgagtgccaaagtgttcatcgactgcaaaatg
gtggcagagaagtccatcaacgcagcgggaaacatctccacagatggagtggaagttctg
ggcaggatggttcgctcccgagagaacaaggacaactctgcaccgttccagctccagaac
tttgacattatttgcagcacatcctgggccaacagagacaagtgctgtgaactgcctggt
ctgaggaaggaggtagactgtccagccttacccaaagcctgcacctgcacacaggacagc
aaaggtccagctggtcctcccggagtgcctggcggtcctggaatccgaggggccagaggt
gatcgtggcgagccgggtccagtggggcccgcaggtcctgttggagacacaggtgtaccc
ggacctcaaggaccacctggacctcagggaccaagtggccgctccatcattggacccgct
ggttctgcaggagagagggggcagaaaggtgaagctggccaacaaggacaacagggtata
cctggaagacccggccctgtgggaagagaaggacctccaggacccaggggacttccaggc
aaagacggcccacagggcagacagggacccccgggaactatggggactccaggatctcct
ggatctcctggaaataccggagcccaaggaaaacaaggaaccctgggaccaccgggtccg
ccaggaacaaagggagagaaaggtgaacggggtgaccttcagtcaacagcatcagttcag
gccattgccagacaagtctgtgagcagctgatccaaagtcacatgtcacgttacaacact
atcttgaaccaagcgcccagtccaccagtgtccatccgcacagtgcctggacctccagga
gaacctggtcgtgaaggtcccccggggccccagggagaacagggaccaccaggaaggcca
ggcttccctggccaaaatggtcaaaatggaaatcctggagaacgaggtcaaccaggagaa
aagggggataaagggtctgcaggtgttggtgtccagggccccagaggacccccaggacct
cctggtccccaaggacagggcagacctggcagccagggtccaacaggtcgccctggaaat
cctggaacttctggtcggcccggagttcccggtccagtcggccctccaggaccgccggga
tactgtgaccagaactcttgtttgggctacaatgttggagaaggtgaagagatcactgac
atccgcagtatccctccagtccaacttccgtccagcgtcttccaaaactatggtgaggca
gaagaggacgacccataccgctactaccagcccaactacccagctcctcaacccgtctcg
cctgatgaccccgcgctggcgcaggacgatgtcgagctgaggtcccccggtgtgtaccgc
agcaaacggagctcaaaggcggaagaggagcaagccgggacaaagaggagaataaagaga
ggagtgaagaatcctcctaaactaactaactga
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integrated database retrieval system
